Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3269 ATGGTATCTCAAGCTTTATCAGTTCCTGCATTTCCCACCTTCACTATCGCTTCTCACACCAAAATCCCTTCCAAACTTGCGTTTTCTCACAGAAACCCCTGCACGATTGCTTCTTCCTTGCCAAGCCCCTATGTTCATTCATCAAAAATCGGGTTATCAAGTAAAGCCCATGGTTTTCGTTTAAAATTTGATGAGAAAAATACACATGATGTTAGTACAAGCTATGGTGTAATTGAAGCCAAGAAGGGGAACCCGCCAATATCACCAGCAGTGATGACTCCTGGAGGAGCTATTGATCTCTCATCTGTTCTGTTCAGGAATCGTATAATATTCATAGGACAGCCAATTAATGCACAAATGGCTCAAAGAGTTATTTCGCAGCTTGTGACTTTGGCTACTATTGATCCAGATGCAGATATACTGATGTACATAAATTGCGCTGGTGGAAGCACATACTCGGTGCTTGCAGTTTATGATTGCATGTCTTGGATAAAGCCAAAGGTTGGTACAGTGTGTTTCGGAGTAGCTGCCAGCCAAGCAACACTTCTCCTTGCAGGTGGGGAGAAGGGAATGCGCTATTCAATGCCAAATGCTCGCATTATGATGGGTCAACCACGATGTGGATTTGGGGGTCATGTTGAGGATGTGAAACGTCTTGTGAATGAAGCTGTTCAATCCCGCCATAAAATGGATAACATGTTTAGTGCTTTCACCGGGCTGCCAATAGAGACGGTGCAAGAATACACAGACAGGGATAATTTTCTATCTGTTTCTGAGGCTTTGGAGGTGGGTCTTATCGACGGTGTCCTGGAAACAGAGTATTGA 825 0.4376 MVSQALSVPAFPTFTIASHTKIPSKLAFSHRNPCTIASSLPSPYVHSSKIGLSSKAHGFRLKFDEKNTHDVSTSYGVIEAKKGNPPISPAVMTPGGAIDLSSVLFRNRIIFIGQPINAQMAQRVISQLVTLATIDPDADILMYINCAGGSTYSVLAVYDCMSWIKPKVGTVCFGVAASQATLLLAGGEKGMRYSMPNARIMMGQPRCGFGGHVEDVKRLVNEAVQSRHKMDNMFSAFTGLPIETVQEYTDRDNFLSVSEALEVGLIDGVLETEY* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3269 274 CDD S14_ClpP_2 99 269 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PRINTS Clp protease catalytic subunit P signature 99 114 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PRINTS Clp protease catalytic subunit P signature 139 159 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PRINTS Clp protease catalytic subunit P signature 170 187 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PRINTS Clp protease catalytic subunit P signature 191 210 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PRINTS Clp protease catalytic subunit P signature 248 267 IPR001907 GO:0004176|GO:0004252|GO:0006508
Psa7g3269 274 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 15 274 IPR023562 -
Psa7g3269 274 Gene3D - 65 274 - -
Psa7g3269 274 Pfam Clp protease 97 272 IPR023562 -
Psa7g3269 274 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC 15 274 - -
Psa7g3269 274 SUPERFAMILY ClpP/crotonase 98 272 IPR029045 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3269 K01358 - gmx:100799710 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3269 7 247080322 247084717 Psa7g3269 7 247080322 247084717 ECH