Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3251 ATGGAGGAAAAACGCCCTCCATCCGCCGCCGATGCACCGGCATCAGAACCTGTAACATCTCGCCGCCGTGCCGGAGGTAACAAGAGAAAATCCGGCTCTCTCAACGCCTCCAATTCCTCTTCCACACCTTCCAAACGCATTACTCGCGAGAAAGCCTCGCCTCTTCACCATCCTCCTCTCCATAATGGTCCTTTAACTAGGGCTCGCCAAATCCCTAACAATTTCTCCGCCGCATCTATTCCGACCATCGCCGGTTCCGCTTCTGCCCCCGCCGCGGTGAAACATGCTCCACAGGCACAGGCTTTGGCTGCGGCAGCGGAACAACTCAAGAAGGAGAGCGAGTGGGAGTCTCTGGAAGCTTCGATTGAAGCTGAATTCAAAGCAATTAGATCTCGCGATACTAACGCGCACGTCGTTCCTACTCATTGTGGTTGGTTTTCATGGTTGAATATCCATCCAATTGAGAAACGTATGGTGCCTTCTTTCTTTAATGGAAAAACTGAAAATCGAACTCCTGATAAATACATGGAGATACGGAATTGGATAATGAAGAAGTTTCATTCAAATCCAAACATACAAATTGAATTGAAAGATTTATCAGAGCTTGATATTGGGGACTTAGATGCTAGGCAAGAGGTACTGGAATTTCTAGACTACTGGGGTTTAATTAACTTCCACCCATTTCCTTCAACGGAGTCTGCTGTGGCTAAAACCAGCGGTGATGGGGAAGCAGAAAAGAATTCCTTGCTTGAAAAATTCTATCACTTTGAAACTCTCCAACTATGCCCACCTACTGCTCAAAAGACTGGCCTAATGATTCCTGCTATGACCTCTGGCTTGTTTCCAGAGTCAACGATCGCTGAAGAGTTGGTGAAACAAGAGGGCCCGGCAGTTGAGATGCTTGAGTACCATTGCAACTCTTGTTCTGGTGATTGTTCTCGCAAACGATACCACTGCCAGAAGCAGGCAGATTTTGATCTATGTGCGGACTGCTTCAATAACAGAAAATTTGGCTCCGGTATGTCTTCGTTGGATTTTATACTCATGGAACCAGCTGAAGCTGCTGGGGTTAGTAGTGGAAAGTGGACTGATCAGGAGACACTTCTGCTCCTTGAAGCATTGGAACTTTATAAAGAAAATTGGAATGAGATTGCAGAACATGTTGGAACAAAGTCAAAAGCTCAGTGCATATTGCATTTTGTTCAAATGCCAATTGAGGATAGCTTTGTTGACTGTGATGAAGATGTTGATGCTGGTTGCAAAGAAACGGAAGATCCAGCTGCAACAAACAACAATTTGTCTGTAGATGAAGATAAAGATAAAGATGCTTCAGAAGTTATTGAGAATGACACTAACATCAAAGGCCATGATGAGACTTCTCAGGCTGAAGATATTAAAGTGAAAGATAATCAAGTGGAGACTCCAAAGTTACAAGATGGTAGTGATGAGAAAACTAGTGAGGGAACTTCTAAATTAGAAGATGACATTAAAGTAAAGTCGGACGAGGAAGTAGATAATGACTGTGTTTTAAACGCTCTTAAGGAAGCATTTGCAGCTGTTGGTTATGATCTTGAACCTGAAGGTCCGTCTTCATTTGCCGAAGTGGGTAATCCTGTCATGGCATTGGCAGCTTTCCTTGCGCAGTTGGTGGGTTCTGATGTGGCTGTTGCTTCAGCTCATAACTACATAAAATCCTTGTCTGGAAATGCTCCTGGCACTGAGATTGCTTCAAGGTGTTGCTTTCTTCTAGAAGATCCACCAGATGATAAGAAAGAAACAACTACCTCTGAGGGGGATTTTAAAAGTGAGGGAGATCAGTCTGACAAAAATGTACAACAGGATACAGCAATGTTAGATGATAAAGATTTAGAAAACGATCACCAGAAAACGAAAATTGCAAGTGATGCTTCAGAAGACAAGATACACCTGGCTTCTACAGATGGACTCCCAGAAAAATCAACTTCAAAGGAGCAAGCAATGATTAATCATGAGAATGGGCTTGACAATTCAAAGATTGACTCCCAGCCAGTAATATCTTCCCAAGATAATGGGACACAAAAGGATGTAGATATGATGTCACCTTCACATCCAATTAGATCGAGTTTGGGTGCTGAAAATGGTGCAAGTACAGGGGCAGTTGAAGATCATGCAGGAAATGTTATGGAAGTGAAAAATGATGGCACAAAGACTAAACAGGATAGCAGCTTTGAGAAGTTGAAACGCACAGCTGTTTCTACACTAGCGGCAGCAGCAGTGAAGGCAAAGCTTCTAGCAAATCAAGAAGAAGATCAAATCCGACAACTCACTTCATCATTGATAGAGAAGCAGTTGCATAAGTTGGAAACGAAGTTGGCTTTTTTCAATGATATGGAAAATATGGTGATGAGAGTAAAGGAGCATTTAGAGCAGTCGCGGCATAAGCTTTACCATGAACGTGCTATGATAATTGCATCTCGCCTTGGTATACAGGCTTCCTCATCCAGAGGTGTACCACCATCCATACCAACCAATAGAATTCCTACAAATTTTGCAAACTCCCTCCCAAGACCACAAGTCGTCATGAATCCTCAAGGGCCACAGATTTCTAGACCTGGGAGCAGCACTGCAGCTACTATGCATCCAAACCCATTAATGTCTGCAACTGCAACAGGAAATTCAGTTCGGCCATCCAGCCAGGAAAACCTTTCTTCTGTTGGGACAAAATAA 2706 0.4346 MEEKRPPSAADAPASEPVTSRRRAGGNKRKSGSLNASNSSSTPSKRITREKASPLHHPPLHNGPLTRARQIPNNFSAASIPTIAGSASAPAAVKHAPQAQALAAAAEQLKKESEWESLEASIEAEFKAIRSRDTNAHVVPTHCGWFSWLNIHPIEKRMVPSFFNGKTENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIGDLDARQEVLEFLDYWGLINFHPFPSTESAVAKTSGDGEAEKNSLLEKFYHFETLQLCPPTAQKTGLMIPAMTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSGDCSRKRYHCQKQADFDLCADCFNNRKFGSGMSSLDFILMEPAEAAGVSSGKWTDQETLLLLEALELYKENWNEIAEHVGTKSKAQCILHFVQMPIEDSFVDCDEDVDAGCKETEDPAATNNNLSVDEDKDKDASEVIENDTNIKGHDETSQAEDIKVKDNQVETPKLQDGSDEKTSEGTSKLEDDIKVKSDEEVDNDCVLNALKEAFAAVGYDLEPEGPSSFAEVGNPVMALAAFLAQLVGSDVAVASAHNYIKSLSGNAPGTEIASRCCFLLEDPPDDKKETTTSEGDFKSEGDQSDKNVQQDTAMLDDKDLENDHQKTKIASDASEDKIHLASTDGLPEKSTSKEQAMINHENGLDNSKIDSQPVISSQDNGTQKDVDMMSPSHPIRSSLGAENGASTGAVEDHAGNVMEVKNDGTKTKQDSSFEKLKRTAVSTLAAAAVKAKLLANQEEDQIRQLTSSLIEKQLHKLETKLAFFNDMENMVMRVKEHLEQSRHKLYHERAMIIASRLGIQASSSRGVPPSIPTNRIPTNFANSLPRPQVVMNPQGPQISRPGSSTAATMHPNPLMSATATGNSVRPSSQENLSSVGTK* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3251 901 Gene3D - 297 346 IPR043145 -
Psa7g3251 901 MobiDBLite consensus disorder prediction 423 442 - -
Psa7g3251 901 MobiDBLite consensus disorder prediction 666 688 - -
Psa7g3251 901 MobiDBLite consensus disorder prediction 30 48 - -
Psa7g3251 901 Pfam Myb-like DNA-binding domain 360 402 IPR001005 -
Psa7g3251 901 ProSiteProfiles SWIRM domain profile. 137 234 IPR007526 GO:0005515
Psa7g3251 901 PANTHER SWI/SNF COMPLEX-RELATED 38 682 - -
Psa7g3251 901 PANTHER SWI/SNF COMPLEX-RELATED 722 864 - -
Psa7g3251 901 ProSiteProfiles Zinc finger ZZ-type profile. 300 354 IPR000433 GO:0008270
Psa7g3251 901 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 722 864 - -
Psa7g3251 901 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3D 38 682 - -
Psa7g3251 901 Gene3D - 143 228 IPR036388 -
Psa7g3251 901 CDD SANT 378 403 IPR001005 -
Psa7g3251 901 SUPERFAMILY Homeodomain-like 133 233 IPR009057 -
Psa7g3251 901 SUPERFAMILY RING/U-box 295 352 - -
Psa7g3251 901 MobiDBLite consensus disorder prediction 586 641 - -
Psa7g3251 901 Pfam SWIRM-associated region 1 746 825 IPR032451 -
Psa7g3251 901 SUPERFAMILY Homeodomain-like 357 409 IPR009057 -
Psa7g3251 901 MobiDBLite consensus disorder prediction 1 65 - -
Psa7g3251 901 Gene3D - 357 408 - -
Psa7g3251 901 ProSiteProfiles Myb-like domain profile. 354 404 IPR001005 -
Psa7g3251 901 Pfam Zinc finger, ZZ type 302 337 IPR000433 GO:0008270
Psa7g3251 901 SMART sant 358 406 IPR001005 -
Psa7g3251 901 Pfam SWIRM domain 140 225 IPR007526 GO:0005515
Psa7g3251 901 ProSitePatterns Zinc finger ZZ-type signature. 305 331 IPR000433 GO:0008270
Psa7g3251 901 CDD ZZ_RSC8 303 347 IPR041984 -
Psa7g3251 901 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 360 396 IPR017930 -
Psa7g3251 901 SMART zz_5 299 343 IPR000433 GO:0008270
Psa7g3251 901 ProSiteProfiles SANT domain profile. 357 408 IPR017884 -
Psa7g3251 901 MobiDBLite consensus disorder prediction 859 901 - -
Psa7g3251 901 MobiDBLite consensus disorder prediction 448 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3251 Psa-Chr7 245128201 245134095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3251 303 400 EF-hand Containing Proteins AT3G07740 37.383 1.63e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3251 K11649 - gmx:100799723 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3251 7 245128201 245134095 Psa7g3251 7 245128201 245134095 ECH