Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3247 ATGGCTACAATTTCCAATCCTTCATTCCTCCTTTTCCTTTCCATCATCGCCATTGCACTCTGCTTTGCTGATTCGCAATCCTTCATCGGAGTAAACTATGGCCAAGTCGCCGACAATCTTCCGGCGCCGGACGCGACTGCCAATCTACTTAAATCTACTTCCATCGGTAAAGTCCGTCTTTACGGCGCCGATCCAGCCATTATAAAATCACTGGCGAATTCTGGTATCGGAATAACCATCGGAGCCGCCAACGGTGACATTCCCAATCTAGCATCAAATCCAAACTCAGCGACTCAGTGGATTAACTCAAACGTGTTACCATACTACCCTGCAAGCAACATCACTCTAATCACCGTCGGAAATGAAGTCATGACCTCTGGCGATAATGGTCTCATATCACAGCTATTCCCGGCGATTCAAAATGTCCAAAATGCCCTCAACTCGGCCTCACTCGGTGGCAAGATTAAGGTTTCCACGGTTCATTCTATGGCCGTGTTGACTCAGTCGGATCCTCCATCTTCCGGGTCATTCGACCCGGCTCTTCAAAGCACACTCAAACAGTTATTGGCGTTTCAGAAAGATAACAAATCACCGTTCACTATTAACCCGTACCCGTTTTTCGCTTATCAAAGTGACCCGAGATCCGAAACACTTGCATTTTGCTTGTTCCAGCCAAATTCGGGTCGGGTTGATTCGGGTAACGGTAAACTTTACACAAACATGTTCGACGCTCAGGTTGATGCTGTACATTCAGCATTAAGTGGACTGGGATTTCAAGACACAGAGATTGTAGTTGCTGAAACAGGATGGCCCTCACGTGGTGACACCAATGAAGTAGGACCAAGTCTTGAAAACGCCAAAGCATATAATGGAAACCTAATTACACATCTTCGATCATTGGTTGGTACTCCTTTGATGCCTGGTAAATCCATTGACACGTACATTTTTGCTCTCTATGATGAAGATTTGAAACCTGGCGCCGCATCCGAACGCGCTTTTGGTCTTTACAAAACCGATCTTACCGTCGCATATGATGCCGGCTTATCCAAGTCTACGCAAAAGAGTCCTCCGATGAAAACAACGCAATGGTGCGTTCCAAAAGGAGGAGTGTCTGATGTTGAATTGCAGGAAAATCTTGACTATGTATGTAGTAGAGAAGGGATAGATTGTGGGCCAATTCAACAAGGAGGTGCTTGTTATGAACCTGATACAACAGTTTCTCATGCTGCATTTGCAATGAATCTTTATTACCAAAAGTTTGGAAGAAATCCTTGGAATTGTGATTTCTCTCAAACAGCAACTCTTACATCACAAAACCCAAGTTACAATGCTTGCATTTATCCAAGTGGAAGTACATGA 1359 0.4474 MATISNPSFLLFLSIIAIALCFADSQSFIGVNYGQVADNLPAPDATANLLKSTSIGKVRLYGADPAIIKSLANSGIGITIGAANGDIPNLASNPNSATQWINSNVLPYYPASNITLITVGNEVMTSGDNGLISQLFPAIQNVQNALNSASLGGKIKVSTVHSMAVLTQSDPPSSGSFDPALQSTLKQLLAFQKDNKSPFTINPYPFFAYQSDPRSETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSGLGFQDTEIVVAETGWPSRGDTNEVGPSLENAKAYNGNLITHLRSLVGTPLMPGKSIDTYIFALYDEDLKPGAASERAFGLYKTDLTVAYDAGLSKSTQKSPPMKTTQWCVPKGGVSDVELQENLDYVCSREGIDCGPIQQGGACYEPDTTVSHAAFAMNLYYQKFGRNPWNCDFSQTATLTSQNPSYNACIYPSGST* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3247 452 Pfam X8 domain 362 434 IPR012946 -
Psa7g3247 452 Pfam Glycosyl hydrolases family 17 29 345 IPR000490 GO:0004553|GO:0005975
Psa7g3247 452 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 11 444 - -
Psa7g3247 452 Gene3D Glycosidases 28 355 - -
Psa7g3247 452 SMART X8_cls 362 447 IPR012946 -
Psa7g3247 452 Gene3D - 357 447 - -
Psa7g3247 452 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 444 IPR044965 GO:0004553|GO:0005975
Psa7g3247 452 SUPERFAMILY (Trans)glycosidases 29 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3247 Psa-Chr7 243726440 243729740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3247 23 448 Miscellaneous Gene Families AT2G16230 66.282 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3247 - - gmx:100778892 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3247 7 243726440 243729740 Psa7g3247 7 243726440 243729740 ECH