Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3217 ATGGCTTCCTTAGTATCTTCAAGTTTGAATGCAGAAGCTCCCGAATTTCACCCCAGTAACCAAGTGCATACCCTTCATCCTCCATACTTCACTTTCGCTCCTCTCAGACATCAACCTTCTTACCCTTTATTATATTACTACTATCCCACTGCCACAAAACATCATTTTCATTCATCAACTTACTTTTCCGTTCGCATTCACCCAGACCTCACCACCGCAACTCCAACTTTTCCACCATCTAGCGGTGTGAAAAATGAAATGGCGGTGGAGGCGGCATCTACAGAGGGTAATGATGGAGAATTGAAAGGCCGTAGTTCTCATGGATTGAGAATCCCGAAGTTTGAGTGGAGGAAGAAGGGACTAGATGTTGCTGAAAAAGACCCTAAACATAACAATGAGAGTTTGAGAAAGAATCATCACCGAAAATATGTTTGTATTCATGAACGTTCTAGGGTTTCCACCGACAGGAAGAATAAAGGAAGTGGTTTTCCTGTGGTTCCCGTTCGTCTGGACGGAGATGAAACAACTGTTATGATAAAAAACATTCCTAGCAAATATACTCGAGACATGATAGTGAAGTTCTTGGAGAACCATTGCATGGTCGAAAATGCAAAAGATCAAGAGAATGGAGAAGAAAACACTTTCTCCTTTGATTTTGTTTACTTACCAATAGATTTCAGAACTGGGTTGAATAAAGGATATGCATTTGTTAATTTCACTAAGCCTAGTGCAGCTTGGAGATTTGTTCTGACAGCTTCAAATCAGAAATGGGAATTGTTCCTTTCCCACAAGATACGTGATGTGGTCGCCGCACGCCTCCAGGGAAAAGAGAAACTGGAGAAACATTTCGGAAGTGTGAATTTTCCCTGTGAGTCCGAGGAAGTTCTGCCACTATGCTTTAGTCCACCTCGGGATGGTGTAATCAAAGGAAGCCAAAGGACATTGGGGAGGCTTCTCTATATGCCTCAGTAG 972 0.4239 MASLVSSSLNAEAPEFHPSNQVHTLHPPYFTFAPLRHQPSYPLLYYYYPTATKHHFHSSTYFSVRIHPDLTTATPTFPPSSGVKNEMAVEAASTEGNDGELKGRSSHGLRIPKFEWRKKGLDVAEKDPKHNNESLRKNHHRKYVCIHERSRVSTDRKNKGSGFPVVPVRLDGDETTVMIKNIPSKYTRDMIVKFLENHCMVENAKDQENGEENTFSFDFVYLPIDFRTGLNKGYAFVNFTKPSAAWRFVLTASNQKWELFLSHKIRDVVAARLQGKEKLEKHFGSVNFPCESEEVLPLCFSPPRDGVIKGSQRTLGRLLYMPQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3217 323 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 7 309 - -
Psa7g3217 323 SUPERFAMILY RNA-binding domain, RBD 169 256 IPR035979 GO:0003676
Psa7g3217 323 PANTHER RNA BINDING PROTEIN 7 309 - -
Psa7g3217 323 Gene3D - 113 285 IPR012677 -
Psa7g3217 323 Pfam RNA recognition motif 2 175 283 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3217 Psa-Chr7 239975544 239977068 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3217 - - mtr:MTR_4g071310 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3217 7 239975544 239977068 Psa7g3217 7 239975544 239977068 ECH