Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3215 ATGGCGCACAGACTCTCACTGCATTTCAATCATACTTCTCTCCTTCAAAACCGCAAACTCATTTCACACCCCAACCGCCACTTACCTCGTGTTTCCCTGGCCCCTTCCCTTCTCAAGAACGCCACTATCCATTCAACTAACCAATGCATTATATCGTCGAAGCACCGTCACTTGGGACTAACAGCTTGCGTAGTTCAAAATCACAACGTCATAGATGAATCTGAAGACATGGAACAAATAAGCGAGGGTTTTGATATGGACAGAGATGAAGAAGAAGTGAATGTGCTGGTTGAGCAGAGTATATGGATTCAGATAAAGGAAATTGTTTTGTTTACTGGACCGGCAATTGGACTTTGGTTGTGTGGACCGTTGATGAGTCTCATCGATACTGCAGTTGTTGGTCAAGGAAGTTCAATTGAACTAGCTGCTTTAGGTCCTGCTACTGTTTTTTGCGATTATTTGGGCTACTCGTTCATGTTTTTGTCGATTGCTACTTCAAACATGGTTGCTACTGCACTTGCTAAACAGGACAGGGCGGAAGTGCAGCATCACATATCTGTCTTGCTTTTTATTGGGTTAGCTTGTGGCTTGGCGATGCTTTTGTTCACAAGGCTATTTGGTGCAACAACGCTCGTAGCTTTTACTGGACTGAAGAATGTACATTTAGTACCCGCAGCTAATACTTATGTCCAGATTCGAGGATTGGCATGGCCTTGTTTGCTTGTTGGATTGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCCTTGAAGGCTTTGGCGGTTGCTAGTATTATAAATGGAATTGGTGATATAATTCTGTGCAGATATTTAGGCTATGGTATTGCTGGGGCTGCATGGGCTACATTGGCATCACAAGTTGTTGCTGCGTATATGATGAGCCAAACTCTAAACGAGAAGGGATACAATGCATTTGCCTTCTCCATTCCTTCAGGGAAGGAGTTTCTGTCAATATTTAGCCTTGCTGCTCCTGTATTTGTGACGTTGATGTTAAAGGTGGCTTTCTACTCGCTAATTATATATTTTGCTACATCAATGGGTACACATAAAATGGCTGCTCATCAAGTCATGCTTCAGATCTACATGTTATGTGCAATATGTGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAGTTGATGTATGGAGTAAATCGGAGTTTGGCAAAGGCTCGGTCACTGCTAAGTTCTCTTGTAACTATTGGAGCTGTATTTGGGTTGCTTTTGGGGATTGTTGGGACATTTGTTCCTTGGTTATTCCCCTACATTTTTACACCCGATCAGATGGTCATCAAGGAGATGCATAAGATTCTGATTCCATACTTTTTAGCGCTAGTGGTGACACCTGCAACTGTCGGCCTAGAGGGAACATTGCTGGCTGGAAGGGATCTAAGATTTATAAGTTTGTCAATGAGTGGATGCTTTTGTTTGAATGGTCTTGTATTACTGATCCTTTGTAGATATGGTTTGCTAGGCTGCTGGTTTGCCCTTGCTGGATTTCAATGGACTCGATTTTCAATGGCCCTTCTGCGCCTTCTATCTCCCAAAGGCATTTTATACTCGGAAGATACAAGTCAGTATGAGCTGCAAAAGTTGAAGACCGCATAG 1644 0.4307 MAHRLSLHFNHTSLLQNRKLISHPNRHLPRVSLAPSLLKNATIHSTNQCIISSKHRHLGLTACVVQNHNVIDESEDMEQISEGFDMDRDEEEVNVLVEQSIWIQIKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLGYSFMFLSIATSNMVATALAKQDRAEVQHHISVLLFIGLACGLAMLLFTRLFGATTLVAFTGLKNVHLVPAANTYVQIRGLAWPCLLVGLVAQSASLGMKDSWGPLKALAVASIINGIGDIILCRYLGYGIAGAAWATLASQVVAAYMMSQTLNEKGYNAFAFSIPSGKEFLSIFSLAAPVFVTLMLKVAFYSLIIYFATSMGTHKMAAHQVMLQIYMLCAICGEPLSQTAQSFMPELMYGVNRSLAKARSLLSSLVTIGAVFGLLLGIVGTFVPWLFPYIFTPDQMVIKEMHKILIPYFLALVVTPATVGLEGTLLAGRDLRFISLSMSGCFCLNGLVLLILCRYGLLGCWFALAGFQWTRFSMALLRLLSPKGILYSEDTSQYELQKLKTA* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3215 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 50 536 IPR044644 -
Psa7g3215 547 TIGRFAM matE: MATE efflux family protein 114 506 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa7g3215 547 CDD MATE_DinF_like 106 526 IPR044644 -
Psa7g3215 547 Pfam MatE 120 272 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa7g3215 547 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 50 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3215 Psa-Chr7 239734877 239763410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3215 K03327 - gmx:100778835 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3215 7 239734877 239763410 Psa7g3215 7 239734877 239763410 ECH