Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3172 ATGTTGCCAAGAAGTAGAACTCTTCCTAGCAGAATCTACCAAGGAGTTATAGAAGAGAGGAAAGATATCAGACACTACATAGAATTGGAACCACTGCCTAAAATCAGAACTGAGACTAAACCAATCACCATTCAGTCCAAGTGCTTCGACGACGATGGTCGCGTCAAGAGAACAGGAACATTTTGGACAGCAACGGCACATATCATCACTGCTGTGATAGGCTCGGGAGTTCTTTCGTTGTCATGGGCAATAGCTCAGCTTGGTTGGGGTGTTGGACCTGTTGTCATGCTTCTATTCGCGGTCATCAATCTCTATACTTCCAGTTTACTAACACAGTGTTACAGAACAGATGATTCTGTTGCTGGACCGAGAAATTACACCTACACGGATGCAGTAAAGTCTATCTTAGGAGGAAAGAAGTTTAAAATTTGTGGTTTGATTCAATATGTGAATCTGTTTGGAATTGCGATTGGATACACTATTGCTGCCTCGGTTAGCATGATGGCCATAAAAAGGTCAAATTGTTACCACGAGAGTCATGGAAATGATCCATGTCATATGTCAAGTAATGTGTACATGATAGCATTTGGTATAGCAGAAGTGATACTTTCTCAAATCCCGGACTTTGATCAAGTTTGGTGGCTATCTATAGTTGCAGCTATCATGTCCTTCACTTATTCTGTGGTTGGATTGGGTTTAGGTGTGGCCAAAGTAGCAGAAAATAGAACTTTTCATGGTCGCTTGATGGGAATTAGTATTGGCACAGTGACACCAGCTGGAACAGTCACTGCCACACAGAAAATATGGAGGAGCTTACAAGCCTTAGGAGCAATGGCTTTTGCATACTCCTTTTCAATTATCCTCATTGAAATTCAGGACACCTTAAAATCTCCTCCTGCTGAGCACAAGACCATGAAAAAGGCCACTATGTTGAGCATCACGGTTACTACAACGTTCTATATACTATGTGGAAGCATGGGTTATGCCGCCTTTGGAGATCATGTACCTGGAAATCTCTTGACTGGTTTTGGATTCTATAACCCTTATTGGCTTCTTGACATTGCCAACTTTGCAATTGTTGTGCACCTTATTGGAGCATACCAGGTATTTTCCCAGCCCTTTTTTGCATTTGTTGAGAAGTGGAGTGCAAGTAAGTGGCCGAAAAACAAGTTTGTGACAGCAGAATATGATATAACAATTCCCTGCATTGGAGTGTACAAACTCAACTTCTTCCGCTTAATATGGAGGACTATTTTTGTGCTGTTGACAACCATCATAGCCATGCTATTACCATTTTTCAATGATGTAGTTGGATTACTTGGAGCTTTTGGATTCTGGCCATTAACAGTTTATTTCCCAATAGACATGTACATCTCACAGAAAAAGATTGGAAAATGGACTAATAGGTGGCTTGGACTTCAGATGCTTAGTGGATGTTGCCTCATCATTTCAATATTGGCTGCTGTTGGATCCATTGCTGGGGTGGTTTTGGATCTCAAGACTTATAAGCCATTCAAAACTAGTTATTAA 1530 0.4105 MLPRSRTLPSRIYQGVIEERKDIRHYIELEPLPKIRTETKPITIQSKCFDDDGRVKRTGTFWTATAHIITAVIGSGVLSLSWAIAQLGWGVGPVVMLLFAVINLYTSSLLTQCYRTDDSVAGPRNYTYTDAVKSILGGKKFKICGLIQYVNLFGIAIGYTIAASVSMMAIKRSNCYHESHGNDPCHMSSNVYMIAFGIAEVILSQIPDFDQVWWLSIVAAIMSFTYSVVGLGLGVAKVAENRTFHGRLMGISIGTVTPAGTVTATQKIWRSLQALGAMAFAYSFSIILIEIQDTLKSPPAEHKTMKKATMLSITVTTTFYILCGSMGYAAFGDHVPGNLLTGFGFYNPYWLLDIANFAIVVHLIGAYQVFSQPFFAFVEKWSASKWPKNKFVTAEYDITIPCIGVYKLNFFRLIWRTIFVLLTTIIAMLLPFFNDVVGLLGAFGFWPLTVYFPIDMYISQKKIGKWTNRWLGLQMLSGCCLIISILAAVGSIAGVVLDLKTYKPFKTSY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3172 509 Pfam Transmembrane amino acid transporter protein 57 496 IPR013057 -
Psa7g3172 509 PANTHER OS05G0424000 PROTEIN-RELATED 24 503 - -
Psa7g3172 509 PANTHER OS02G0102200 PROTEIN 24 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3172 Psa-Chr7 236256939 236259135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3172 47 509 Organic Solute Cotransporters AT5G09220 71.767 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3172 K24917 - gmx:100779552 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3172 7 236256939 236259135 Psa7g3172 7 236256939 236259135 ECH