Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3166 ATGGATTCGTCATCTTCTTTACACATAGCAATGTACCCATGGTTTGCCATGGGCCACCAAACTCCATTTCTTCACTTAGCTAACAAACTAGCCAATAAAGGCCACAAAATAACATTTTTCACACCTAAATCAGTACAATCTAAATTACAACCATTCAATCTCCACCCTCAATCAATCACTTTCGTCACTATCACAGTTCCCCATGTTGAAGGTCTTCCTCCCAATGCAGAAACAACAGCTGATGTCTCATTCCCTTTACAACCACACATCATGACAGCCATGGATCTAACACAACCCGACATTGAAACTCATCTCACTAATCTCAAACCTCACTTTGTTTTCTATGATTTCACACATTGGATGCCATCTTTAACAAAACGTTTAGGTATCAAATCTCTTCTTTATTGCACTGGTAGTTCGGTTATGATTGGCTACAACTTAGTACCAGCTAGATTTTTAAATCAAAATATAACAGAATTTAATCTCATGGAACCTCCTCCTGGTTACCCTGATTCATCTATCAAGCTTCATAGTGATGAAGCAAAATTTTTGATATCATTGGGAATCAGAACTTTTGGTAGTAATGTTTCTTTCTATGATAGACAAGTCATTGCTTTCAATGAAGCTGATGCATTAGGATTCAGAACTTGTAGAGAAATCGAAGGACCTTATCTTGATTACTTACATAAACAGTATAATAAACCGGTTCTATCTTCAGGACCTGTTATACTCGAAAAACCTAATTCTGTTTTGGATGAAAATTGGTCTATTTGGCTTGCTGGATTCAAGACAGATTCAGTTGTTTACTGTTGTTTGGGAAGTGAATGTGTTTTGGAAGTGAATCTATTTCAAGCATTAATGCTTGGACTTGAGTTAACAGGTATGCCATTTTTTGCGGCTTTGAAGCCACCTTCTGGTTTTGCAACAGTGGAAGAAGCATTACCAGAAGGGTTTGCAGAAAGAACAAAAGGAAGAGGTGTTGTTTTTGGTGGTTGGGTACAGCAGCAACTGATTTTGGAGCATCCTTCTGTTGGGTGTTTCATTACACATTGTGGTTCAGGTTCTTTGTCTGAGGCATTGGTGAATAAATGTCAATTGGTTTTGTTGCCAATCATTGGTGATCAGATAATGAATGCTAGGATGATGGGAAATAACTTGAAAGTTGGTGTAGAAGTCGAGAAAGGTGAAGATGGTTTGTATACTAAGGATAGTGTTTGTAAGGCTGTGAGAATTGTGATGGAGGATGAGAATGAAACCAGTAAGAAAGTGAGGGTTAATCATGCTAAGATTAGAGAGATGTTGCTTAATGAAGATCTTGAATCATCTTATATTGATGATTTCTGCAACAAGCTTCAAGAGATAGTTACGGAAAAGAATTGA 1380 0.3739 MDSSSSLHIAMYPWFAMGHQTPFLHLANKLANKGHKITFFTPKSVQSKLQPFNLHPQSITFVTITVPHVEGLPPNAETTADVSFPLQPHIMTAMDLTQPDIETHLTNLKPHFVFYDFTHWMPSLTKRLGIKSLLYCTGSSVMIGYNLVPARFLNQNITEFNLMEPPPGYPDSSIKLHSDEAKFLISLGIRTFGSNVSFYDRQVIAFNEADALGFRTCREIEGPYLDYLHKQYNKPVLSSGPVILEKPNSVLDENWSIWLAGFKTDSVVYCCLGSECVLEVNLFQALMLGLELTGMPFFAALKPPSGFATVEEALPEGFAERTKGRGVVFGGWVQQQLILEHPSVGCFITHCGSGSLSEALVNKCQLVLLPIIGDQIMNARMMGNNLKVGVEVEKGEDGLYTKDSVCKAVRIVMEDENETSKKVRVNHAKIREMLLNEDLESSYIDDFCNKLQEIVTEKN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3166 459 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Psa7g3166 459 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Psa7g3166 459 Gene3D Glycogen Phosphorylase B; 256 436 - -
Psa7g3166 459 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 3 454 - -
Psa7g3166 459 Gene3D Glycogen Phosphorylase B; 1 255 - -
Psa7g3166 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 440 - -
Psa7g3166 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 329 416 IPR002213 GO:0008194
Psa7g3166 459 PANTHER GLYCOSYLTRANSFERASE 3 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3166 Psa-Chr7 234439054 234440707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3166 5 459 Glycosyltransferase AT5G54010 45.614 2.67e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3166 K22794 K12933 gmx:100780270 681.404