Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3140 ATGACAGTTTCAGCAACATCGTCCCTAGTTCCTCCTCCAACCACTAATAATTTATCTAGACGTTCCGCAAATTATCATCCCAACATTTGGGGGAATCATTTTATTCAATATCTATCGGAGGAACCTATGGAATTGGATGAAATAATGAAGCAGATTATACTGCTAAAAGAAAACGTGAGGCAGATGCTACTCCCTACAAACCCTTTGAATGATGCTAATTTGATCGATTCAATCCAACGTTTGGGGTTATACCATCATTTTGAGCATGAGATCGGAGAATTATTGCAACATATTCACAATAATTATGTTCAAAATGGAACAATAATTCTCAATTTTAACGAAGATCTTCATTCTATTGCACTTGTCTTTAGGTTACTAAGACAACATGGATATCCCATATTGCCGGATGTTTTTGAAAAGTTCAAGAACGAGCAAGGAAACTTCAATGAAACACTTGTTGGTGATGTTGAGGGAATGTTAAGTTTGTATGAAGCCACACATTTAAGGATTCATGGAGAAGAATTATTAGATGAAGCACTTTCTTTCACTTCCTCACACCTTAAAATGATGACTACTCAATTAAGTCCTTCTCTTGCTACTAAAATTAATCATAGCTTAAAGAGGCCACTCTTCAAAAACATGCCTAGATTAGTGGCAAGGAATTATATTTCTACTTATGAAGAAGATCCCTCACATGATGCAACTTTGCTATTACTTGCCAAAATAGATTTCAATCTGCTACAAAAACAGCATCAGAAAGAACTTGGTGATATTTCAAAATGGTGGAAGGATTTGGATTTTGAAACAAAACTGCCATTTGCACGCAATAGAATAGTTGAAGCATACTTTTGGATATTGGGAGTATATTTTGAGTCTCAATACTCTGTCGGTAGAAAGATAATGACCAAGGTGATATCCATGACGTCAGTAATTGATGATATATATGATAACTATGGTACAATAGATGAGCTACAACTTTTCACTCAAGCAATTCAAAGGTGGGATATGAGTTGCATGGATTTTCTACCAGAATACATGAAATTTTGCTACAAAGCCCTTTTGGATGTTTATGAAGAAATGGAGCAAGAGATGGTTAAAGAAGGAAGAGCTTTTTGTGTATATTATGTCAAAAATGAAATGAAAAGATTGGTACATGCCTACTTGACTGAGGCCAAATGGTTCAGTTGTAATTTTATACCAACAATGGAAGAATACATGGCTCTAGGAATAGTAACTTCTGGTTACTATCTACTCACAGCAACATCCTTCATTGGAATGGGATGCATTGCTACTGAAGAAGCTTTCCAATGGTTAACCAATAACCCCAAAATTGTTAATGCTTCAACAAGAATTACCAGACTCATGGATGATATTGTTTCCAATGAGTTTGAGCAGAAGAGAGGGCATGGTGCCTCTTCTATAGAGTGCTACATGAATGAACATGGTGTAACTAGATCAGATGCCATTGAAGAACTCTCGAGACAGGTTACAAATGCTTGGAAGGATATCAATGAGGAACTTCTTGATTCAACTGAAGTGCCAAAGCCTCTCCTTATGCGAGTTCTCAATTTATCACGTGTCCTTCATGTGCTTTATAAAGATGAAGATTGCTACACTAACTCCCAAGGATCAACAAAGAATGACATAATATCTACCTTGTTGAATCCATGTCCAATATGA 1680 0.3613 MTVSATSSLVPPPTTNNLSRRSANYHPNIWGNHFIQYLSEEPMELDEIMKQIILLKENVRQMLLPTNPLNDANLIDSIQRLGLYHHFEHEIGELLQHIHNNYVQNGTIILNFNEDLHSIALVFRLLRQHGYPILPDVFEKFKNEQGNFNETLVGDVEGMLSLYEATHLRIHGEELLDEALSFTSSHLKMMTTQLSPSLATKINHSLKRPLFKNMPRLVARNYISTYEEDPSHDATLLLLAKIDFNLLQKQHQKELGDISKWWKDLDFETKLPFARNRIVEAYFWILGVYFESQYSVGRKIMTKVISMTSVIDDIYDNYGTIDELQLFTQAIQRWDMSCMDFLPEYMKFCYKALLDVYEEMEQEMVKEGRAFCVYYVKNEMKRLVHAYLTEAKWFSCNFIPTMEEYMALGIVTSGYYLLTATSFIGMGCIATEEAFQWLTNNPKIVNASTRITRLMDDIVSNEFEQKRGHGASSIECYMNEHGVTRSDAIEELSRQVTNAWKDINEELLDSTEVPKPLLMRVLNLSRVLHVLYKDEDCYTNSQGSTKNDIISTLLNPCPI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3140 559 SFLD Isoprenoid Synthase Type I 234 557 - -
Psa7g3140 559 CDD Terpene_cyclase_plant_C1 20 556 IPR044814 GO:0010333|GO:0016102
Psa7g3140 559 Pfam Terpene synthase, N-terminal domain 29 206 IPR001906 GO:0010333|GO:0016829
Psa7g3140 559 PANTHER TERPENE SYNTHASE 2-RELATED 19 543 - -
Psa7g3140 559 PANTHER OS04G0344100 PROTEIN-RELATED 19 543 - -
Psa7g3140 559 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 26 232 IPR008930 -
Psa7g3140 559 Pfam Terpene synthase family, metal binding domain 237 502 IPR005630 GO:0000287|GO:0010333|GO:0016829
Psa7g3140 559 SUPERFAMILY Terpenoid synthases 232 556 IPR008949 -
Psa7g3140 559 Gene3D Farnesyl Diphosphate Synthase 27 547 IPR008949 -
Psa7g3140 559 Gene3D - 66 232 IPR036965 GO:0010333|GO:0016829
Psa7g3140 559 SFLD Terpene Cyclase Like 1 C Terminal Domain 234 557 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3140 Psa-Chr7 229886631 229889325 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3140 K15803 - aprc:113865764 777.319