Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3090 ATGGCGTTTAGAACCATCGTATTTGCTGTGATGATAACAATACTGTTAGAGATTCAGATATGCTTACCGGCGGAGATTAGCCGCGCTGATTTCCCACACGGATTTGTATTTGGCACTGCTTCTTCTGCTTTTCAGTATGAAGGAGCTGTGAAAGAAGATGGAAGGGGACCATCTATATGGGATACCTTTTCTCATACTTTTGGCAAGGTTACAGATTTCAGCAATGCTGATGTTGCAGTCGATCACTACCACCGATTCGAAGAAGACATTCAGCTCATGAAGGACTTGGGGATGGATGCCTATAGATTTTCCATTTCTTGGTCTCGGATTTTTCCCAATGGATCTGGCGCAATCAATCAGGCAGGAATTGATCATTATAATAAATTCATCAATGCATTACTAGCAAAAGGAATTGAACCTTATGTGACACTCTACCACTGGGACCTACCTCAAGCCTTGGACGACAAGTATAAGGGATGGCTCAGCACTGAAATCATAAAGGACTTTGCAGCTTATGCTGAGACATGCTTTCAGAAATTCGGAGACAGGGTGAAGCACTGGATCACATTTAATGAGCCACATACATTCACTACACAAGGATATGATGTTGGTTTACAAGCACCTGGACGGTGCTCTATTCTCTTTCATTTGTTTTGTAAAGCAGGAAACTCTTCTACTGAACCTTACATTGTTGCTCACAATGTCCTACTTACACATGCAACAGTAGCAGATATTTATAAGAAAAAGTATAAGAATATTCAAGGTGGATCACTTGGAGTAGCTTTTGATGTCATTTGGTATGAACCTGCCACAAACACTAAAGAAGACATTGAAGCAGCTCAGAGAGCTCAAGAGTTTCAGCTAGGCTGGTTTCTTGATCCTTTGATGTTTGGAGATTATCCAAGTTCAATGAGAAGCAGAGTAGGAAACAGGCTGCCAAAATTTTCTCCATCCGAGTCTACTCTTGTTAAAGGTTCACTAGATTTTGTTGGAATCAACCATTACACCACATTTTATGCAAGAAACAATTCTACTCATGTAATTGGAACTTTGCTCAATGATGCTATTGCAGACTCCGGTACCATTACCCTTCCATTCAACGGCACTAAAGTTATTGCAGAAAGGGCAAATTCAATATGGTTATACATCGTGCCACAAAGTATGAGAACCTTAATGAACTACGTCAAACAAAAATATGGCAACCCTCCCGTCTTTATCACCGAAAGTGGAATGGATGATCCAAATAGTATATTTATCTCCCTTAAAGACGCTTTAAAGGACGAGAAACGTATTCGATATTACAGTGGCTATTTATCTTATCTACAAACAGCTATCAAAGATGATGGTTGCAATGTGAAAGGATATTTTGCTTGGTCATTGCTGGATAATTGGGAGTGGGTAGCTGGATATTCTTCAAGATTTGGTCTGTATTTTGTTGACTACAAAGACAACTTAAAGAGATACCCTAAACAATCTGTTCAATGGTTCCAGAACTTTCTGAAATCAAAACCAGCTAAGTAG 1521 0.3964 MAFRTIVFAVMITILLEIQICLPAEISRADFPHGFVFGTASSAFQYEGAVKEDGRGPSIWDTFSHTFGKVTDFSNADVAVDHYHRFEEDIQLMKDLGMDAYRFSISWSRIFPNGSGAINQAGIDHYNKFINALLAKGIEPYVTLYHWDLPQALDDKYKGWLSTEIIKDFAAYAETCFQKFGDRVKHWITFNEPHTFTTQGYDVGLQAPGRCSILFHLFCKAGNSSTEPYIVAHNVLLTHATVADIYKKKYKNIQGGSLGVAFDVIWYEPATNTKEDIEAAQRAQEFQLGWFLDPLMFGDYPSSMRSRVGNRLPKFSPSESTLVKGSLDFVGINHYTTFYARNNSTHVIGTLLNDAIADSGTITLPFNGTKVIAERANSIWLYIVPQSMRTLMNYVKQKYGNPPVFITESGMDDPNSIFISLKDALKDEKRIRYYSGYLSYLQTAIKDDGCNVKGYFAWSLLDNWEWVAGYSSRFGLYFVDYKDNLKRYPKQSVQWFQNFLKSKPAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3090 506 Pfam Glycosyl hydrolase family 1 29 503 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 Gene3D Glycosidases 20 502 - -
Psa7g3090 506 PANTHER BNAA08G19770D PROTEIN 10 502 - -
Psa7g3090 506 SUPERFAMILY (Trans)glycosidases 25 502 IPR017853 -
Psa7g3090 506 PRINTS Glycosyl hydrolase family 1 signature 326 340 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 PRINTS Glycosyl hydrolase family 1 signature 404 412 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 PRINTS Glycosyl hydrolase family 1 signature 427 438 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 PRINTS Glycosyl hydrolase family 1 signature 449 466 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 PRINTS Glycosyl hydrolase family 1 signature 473 485 IPR001360 GO:0004553|GO:0005975
Psa7g3090 506 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 35 49 IPR033132 -
Psa7g3090 506 PANTHER GLYCOSYL HYDROLASE 10 502 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3090 Psa-Chr7 224954524 224959296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3090 19 502 Glycoside Hydrolase AT1G26560 79.339 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3090 K01188 - gmx:100789360 895.575