Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3015 ATGACGATGTTGTTGGAGGACGTCATTCGATCCATCGAGCTATGGCTGCGTCTCTTGAAGAAGCCCCAACCTCAAACCTACATCAACCCCAATCTCGATCCTGTGTTATTGGTACCCGGCGTTGGTGGCTCGATCCTTAATGCTGTTAATACCGACGGTAGCCAGGAACGTGTTTGGGTTCGGTTTCTCTCCGCCGAGTATAAGCTGAAAACTAAGCTTTGGTCACGCTATGATCCTTCTACTGGAAAAACCGTAACAATGGATCCAAAATCAACAATTGTGGTTCCTGAAGATAGGCACGGACTCCATGCAATTGATGTTTTAGATCCTGATTTGGTAGTTGGAAGTGAGGCTGTATATTATTTCCATGACATGATCGTTCAAATGCAGAAATGGGGGTATCAAGAGGGGAAGTCACTTTTTGGCTTTGGATATGACTTTCGACAAAGCAATAGGTTGCAGGAAACAATGGATCGGCTTGCCACAAAGTTGGAATTAATTTATAATGCTGCTGGAGGGAAAAAGATAAACCTCATAAGTCATTCTATGGGTGGTCTTTTGGTGAAATGTTTCTTGTCCCTGCATAGTGATATTTTTGAGAAATATGTTAAGAATTGGATTGCAATTACTGCGCCATTCCAGGGTGCCCCTGGATGTGCCAATTCTACCCTTTTAAATGGAATGTCATTTGTGGAAGGATGGGAGCAAAACTTTTTTATTTCCAAATGGAGTATGCACCAGTTGCTGATTGAGTGTCCATCAATATATGAACTAATGGCCTGTCCTAATTTTCATTGGCAACACATTCCTGTTCTGGAATTGTGGCGTGAGAGACTTCATTCGGATGGAAAATCTCACGTTATTCTGGAGTCATATCCGCCATGTGATAGTGTCGAGATTTTGAAGCAAGCTCTTTTAAACAACAAACTTAATTATGATGGTGAGGAATTGCCTCTGCCCTTCAACTCAGAGATTTTGGAATGGGCAAACAAAACGCAGGAGATTCTATCTTCTGCCAAACTTCCATCGGGTGTTAAATTTTACAATATTTATGGGACCAATCTTCAGACCCCTCATAGCATTTGCTATGGAAATGCAGACAAGCCTGTTTCAGATCTGCACGAGTTACGCTATTTACAGCCCAGGTTCGTGTGTGTTGATGGTGATGGAACAGTTCCAGTAGAGTCAGCTAAGGCTGACGGCTTCATTGCGCAGGAAAGGGTTGGAATCCCAGGGGAGCATCGAGGTATCCTTTGTGAGCCTCATCTATTCAGGATTCTCAAGCACTGGCTGAGAGCAGGAGATCCCGATCCCTTTTACAATCCTGTCAATGATTATGTGATTCTACCTACTGCTTTTGAAATAGAGAGCCATACAGAAAAGGGTATAGTAGTAACATCCCTTAAAGAGGAATGGGAAATCATTTCCAATGACCAAGATGGTCAAAGCAATACCGGTGACAAAATGTCCTTGAGCTCAATATCTGTTTCACAAGAAGGAGCCAATAAATCGCATTCTGAGGCTCATGCTACTGTCTTTGTTCACCCTGGCAGCGACGGTAAACAGCACATTGAACTGAATGCATTATCTGTTTCAGTTGATGCCTCATGA 1611 0.4295 MTMLLEDVIRSIELWLRLLKKPQPQTYINPNLDPVLLVPGVGGSILNAVNTDGSQERVWVRFLSAEYKLKTKLWSRYDPSTGKTVTMDPKSTIVVPEDRHGLHAIDVLDPDLVVGSEAVYYFHDMIVQMQKWGYQEGKSLFGFGYDFRQSNRLQETMDRLATKLELIYNAAGGKKINLISHSMGGLLVKCFLSLHSDIFEKYVKNWIAITAPFQGAPGCANSTLLNGMSFVEGWEQNFFISKWSMHQLLIECPSIYELMACPNFHWQHIPVLELWRERLHSDGKSHVILESYPPCDSVEILKQALLNNKLNYDGEELPLPFNSEILEWANKTQEILSSAKLPSGVKFYNIYGTNLQTPHSICYGNADKPVSDLHELRYLQPRFVCVDGDGTVPVESAKADGFIAQERVGIPGEHRGILCEPHLFRILKHWLRAGDPDPFYNPVNDYVILPTAFEIESHTEKGIVVTSLKEEWEIISNDQDGQSNTGDKMSLSSISVSQEGANKSHSEAHATVFVHPGSDGKQHIELNALSVSVDAS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3015 536 Pfam Lecithin:cholesterol acyltransferase 89 397 IPR003386 GO:0006629|GO:0008374
Psa7g3015 536 MobiDBLite consensus disorder prediction 476 509 - -
Psa7g3015 536 Gene3D alpha/beta hydrolase 82 433 IPR029058 -
Psa7g3015 536 Coils Coil 535 536 - -
Psa7g3015 536 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 1 493 - -
Psa7g3015 536 MobiDBLite consensus disorder prediction 477 505 - -
Psa7g3015 536 SUPERFAMILY alpha/beta-Hydrolases 29 449 IPR029058 -
Psa7g3015 536 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4 1 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3015 Psa-Chr7 218986956 218995146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3015 33 431 Acyl Lipid Metabolism Gene Families AT3G03310 50.620 6.16e-144 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3015 K22389 - gmx:100777083 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3015 7 218986956 218995146 Psa7g3015 7 218986956 218995146 ECH