Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2879 ATGGGTACTTCTCAGAGCCGCGAGGGCCGTGAATTCACCGATTCCGACTCCGATTACGACGAACAAGAACAAGAAGAAGTAGAAGACGAATACCAAGACGCACAAACTCACTCTCAACCCCATTCCCATTCCACCCAACTCGATGAAGTAGACGCCAAACTCAAAGCCTTAAAACTCAAGTATCCTTCTTCTTCTTCTTCACCTTCGCAACCTCTTCCTAAAAACTCCGTCAAGCTTTACCTTCACATCGGCGGCAACACTCCCAATGCCAAATGGATCCTCTCCGACAAACGCACTTTCTACACGTTCGTCAAAATCGAAGAAGACGACGAAGACGAAGATGAACAAAACGACGCCGCTCAAGGTCCGTGGATTCTCAAAGTCGGTTCCAAAATTCGCGCTAGGGTTTCCACTGAACTGCAATTGAAGATGTTCGGCGATCAACGTCGGGTTGATTTTGTATCTAACGGTGTCTGGGCTCTAAAATTCCCCACCGATGAAGCTTACCGGAAATTCGTCACTGAATTTCAGGATCACACGTTTGAGAATGTTTATGGTCAATCTCCAACTGAAGAGAACAAGATCAAGGTTTACGGTAAGGAGTTTATCGGTTGGGTGAAGCCTGAAGCCGCGGATGATTCGGTTTGGGAGGATGCTTCAGAAGATGGTTTTCGGAAGAGCCCTGAACCGTATCGATCTAGAGGTGATTTGATGGAGGAGTTCGAAGAAGCTGCGAACGGAGGTATTCAAACCTTAACCCTAGGTGCTCTCGACAATAGTTTCCTCGTTAACGACACTGGCTTTCATGTTTACCGGAATTTCGACAAGGGAATTCGCAAGGGGGTTGATGTGAAATTTGAAGGTGGGAACCTCCGGGAAGAGACTCCGAACAAGGCTTTGTTGATGAGAGCAGAGACTAACATGATGCTGATGAGTCCCCTGAATAATGGAAAGCCACACGCTTCAAAGCTTCATCAACTTGATATAGAAACCGGGAAGATTGTTACGGAGTGGAAATTTGAGAAGGATGGAGCTGATATCACGATGAGGGATATCACAAATGATACGAAAGGATCACAATTGGATCCTTCCGAATCAACCTTTTTAGGCTTGGACGATAACAGATTATGTCAATGGGATATGCGTGATAGAAAAGGAATTGTTCAGAATATTGCAACGGCTAGTTCTCCAGTGTTGCATTGGAGTCAGGGGCATCAATTTTCAAGAGGAACAAACTTTCAGTGCTTTGCAACAACTGGAGATGGTTCGATTGTGGTGGGATCTCTTGATGGGAAGATAAGACTGTATTCGAAAACATCTATGAGGCAGGCTAAGACTGCTTTTCCGGGGCTTGGTTCGCCTATTACGAGTGTTGATGTCACTTTTGATGGAAAGTGGGTGTTGGGAACCACTGATACTTATTTGGTGTTGATTTGTACATTGTTTACCGATAAAGATGGGAAGACAAAGACTGGATTTGGTGGTCGTATGGGAAACAGGATAGGTGCACCTAGACTTTTGAAACTCACTCCGTTGGACTCTCATTTGGCGGGCACTACCAATAAGTTTCATGGTGGTCACTTCTCATGGGTAACTGAGAACGGTAAACAAGAGCGACACCTGGTTGCAACTGTGGGCAAATTCAGTGTCATATGGGATTTTCAGCAGGTAAAGAACAGTGCTCATGAATGTTACAGGAATCAAGAAGGGCTGAAAAGCTGTTACTGTTACAAGATAATATTGAAGGATGAGTCAATCATAGAATCACGATTTATGCATGACAAATTTGCCGTTAGTGACTCCCCAGAAGCTCCGTTGGTGGTAGCAACTCCAATGAAAGTTAGCTCTATCAGTATGTCCGGAAGGAGAACCGGTTAA 1878 0.4494 MGTSQSREGREFTDSDSDYDEQEQEEVEDEYQDAQTHSQPHSHSTQLDEVDAKLKALKLKYPSSSSSPSQPLPKNSVKLYLHIGGNTPNAKWILSDKRTFYTFVKIEEDDEDEDEQNDAAQGPWILKVGSKIRARVSTELQLKMFGDQRRVDFVSNGVWALKFPTDEAYRKFVTEFQDHTFENVYGQSPTEENKIKVYGKEFIGWVKPEAADDSVWEDASEDGFRKSPEPYRSRGDLMEEFEEAANGGIQTLTLGALDNSFLVNDTGFHVYRNFDKGIRKGVDVKFEGGNLREETPNKALLMRAETNMMLMSPLNNGKPHASKLHQLDIETGKIVTEWKFEKDGADITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGIVQNIATASSPVLHWSQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITSVDVTFDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFGGRMGNRIGAPRLLKLTPLDSHLAGTTNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQEGLKSCYCYKIILKDESIIESRFMHDKFAVSDSPEAPLVVATPMKVSSISMSGRRTG* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2879 625 SUPERFAMILY Putative isomerase YbhE 323 521 - -
Psa7g2879 625 Pfam VID27 C-terminal WD40-like domain 258 566 IPR013863 -
Psa7g2879 625 MobiDBLite consensus disorder prediction 15 30 - -
Psa7g2879 625 Gene3D - 320 587 IPR015943 GO:0005515
Psa7g2879 625 MobiDBLite consensus disorder prediction 1 49 - -
Psa7g2879 625 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 623 IPR040458 -
Psa7g2879 625 PANTHER DEM PROTEIN 1 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2879 Psa-Chr7 206568604 206572473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2879 1 623 Acyl Lipid Metabolism Gene Families AT3G19240 69.466 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2879 - - adu:107469745 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2879 7 206568604 206572473 Psa7g2879 7 206568604 206572473 ECH