LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g2863	ATGTTCCCCTGGAAGATTGCAAAATCGGCGGAAGCCATGTTCTCCCGCTGGGCTCTCAAGAGGGTTTGCAAATTCTTCCTGAAGAAGAAATTAGGACAGTTTATCCTCGGCGAAATCGACCTCGACCAGCTCGATGTTCAACTTTCACAAGGTACCATTCAGCTCACCGATCTCGCTCTCAATCTCGACTTCATCAACGCCAAGCTTGGTAGAACATCATCTATAATGGTAAAAGAAGGGTCAATTGGATATCTTTTGGTTAAAATGCCTTGGAGTGGTAAAGGTTGTGAGGTTGAAGTGAATGAGCTTGAACTCGTAGTTTCTCCTTGCGTAAATAAAACCTCAACCACTGGAGATGAAGCTTGTGGTTCTTCTGATGTTGATAAAGATGATTGTGAAATTAAATATAGCTCAAGTAAGACCAATCTTGAAACAGCAGATGATGCTATGAAGTCAGTTTCAATGGATGTTCATGAGGGTGTGAAAACTATTGCAAATATGATAAAGTGGTTGCTTACTAGCTTTCATGTGAAAATAACAAATGTGATTGTTGCGTTTGATCCATTTTTGGAAAATGATGAAGGAAGGGAAATAGATTGTCATGGTACTTTAGTTCTTCGGGTTTCTGAAATACAATGTGGGACCAGTTTGTCTGAAGATACTGAGTCTAAGGATGATCTCCTTGGAATAAGCCGGTTAACAAATTTTGTGAAGTTTGATGGGGCGGTACTTGAGATTCTCAAAATAGATAATGAAAAGAATCAGTTACCAGGTCCTGGTCTGGGTTCAACTAGATCCACTTGTCCGGTCATGACCGGGAAACAAGGTGGATTTGGTGGAAATATAAAATTAAGTATTCCTTGGAAGAATGGTTCCTTGGACATTTGCAAGGTGGATGCAGACGTTTGTGTTGATCCCGTAGTGTTAAGATTTCAGCCTGGCTCAATTGAGTGGCTATTGAAATCATGGGGAACTCTTAAAAATTTGAATAAGGATGCCAACTGCAAGAATCACAACTTAAGAGGACCTTCACATTTAAATTCCGCACTGTTGAATCCTTCAACAACTTCAGTTTCTATTGCCAATGTCACCGGTGAAATGATAACTGGCCATGGTAGTTTACGCGCCGATTGTGCCTCCTTGACCCAACCAGAAGATCCAGAATCCCCTGAAGCTCTGCTTCCTGCTGCTAATCTTATTTCAGACTGGGTGCCATTTTCTACTCACATGAATCTTAAAGATGGTTTTCAAGAACCTGATTTTGGGGCGAGCGTGGACCAGTTTTTTGAATGTTTTGATGGAATGAGAAATTCTCAATCTGCTTTAGGGAGTAGTGGAATGTGGAACTGGACATGTTCGGTTTTCAGTGCTATTACGGCTGCATCCAGCCTTGCTTCTGGATCTTTGCATCTTCCCTCTGAACAGCATCACATGGAAACCAATCTCAGGGCTACTTTTTCAGGAGTATCTATTGTTTTATCCTTCTGTGATGATGAACAGAGCTGTTTTTATAAGTCTAAAATTGGTAACACAGTTGGGTCACAGATTGATTATCTTGGTGCAGAGTGCAATGAAATTGTTGTTGCCTTGAAGGTATGTCCTCAAGTAATGACTTTTGATGGCACCGTGAAGCGTGTAGAAGTTGCTAATTTTTTGAACATTGGAAGTAATGCTGAAAATCAGAGTGCTTTGGTTGGACACTTACAAACTAAGGTCCTTGATGCTCTCCCTTTGTCTACCTCTTACAATCTATATTCAGATTCATTAATTGGGCCAGTTGCAACAGACTTTCCATTTGGAAATAAGGATTTCTTACTGAAAGTTACATTGTTTAAAACTTCTGGTGTCACCAATTGCAAATTTACAGTGCAATCAAGTTCTTCAGATGGTTGTGTGACTGGGATGACATCATTCTCACTGAACCTGCCCCCTTTTACTTTCTGGGTAATATTTTCTGTGATAAATGTGCTCACTAACCTGCTAAAGGAAATTGGAAAATCACTTGAAGTGCATAATAAAGCCGAAGAGATTTTTTCTGAAGCCTCAGATGAAAAGTGTGGATCATCTCAAAATGACACGAAGCAAAGTTTCAGTCCCTGTGCGACATCCTTCTCCACAACAGAATGCTTGCATGGTGATATATCAATTTCTAGTGCAAGAGTAATACTGTGTTTTCCTTTTGATAAGGCTGGAGATCGTGCTGCTTCATTTTCCTGGGAAAAGTTAATTGCTCTTGATTTTAGTTCATCGTCCCCTTTGAACAAGGGTTGCACCTCAGATGGTAGCCAAACTTCAAGTGCAAGTTCAAAGAAAAGATTTCCGTCTGTAGCAGCACAATCTCTTCAGTTGAATTTTTGTGATCTAGATGTATACTTGATCACATCAACAAGTAGCGACAGTGGTAGAATAAGCTCCAATGATGTGAAGAATGAGAAATTTTATGGCAGCTGTTTTCTTTCCATTGCTCGTAGAAGGGGCAGTTTCTCTGTTTTTCGTGTGGTTTGGCAGGAGGGTCAAGTGACCGGTCCTTGGATTGCTAAGAAAGCTAGATTATTTGTTAATTCAGAGCAATCAAAGGGAAAAGATGATATTGCCGGAAGAGGGTATGAATATGCGTCTGCATCAACGGTGAAAGATTTGGAAGATTGGAAGTCTCAAACTCAACAAGAGATGATTCTAAGCTCGTCATTACTCATGCATGTCCATCTATCTCAAGTTGTGATTAATATGAATGATTCTCTATATAAAGGCATATACGAGCTTTTACTTCAGATGCTAAATGCAACAGCATGTGAGACTTCTCAGGAAGCCAATGTGGATAAACATTCTCCAGTCTCACAATCATCGGTATTTTTAGAATGTGATTCTGTTGAAATTCTTATTAGTAGGGATACATCTGAGAGTATCGAAAGCTCAATCAAGAGTGAGCTTCCTGGACAATGGCATCAATTCAAGCTGAAGGTTCAAGGGTTTGAGTTGCTATCTGTCACTAATACAGGTGGTGTTAAGGCTGCGAGTTTCTTCCGACTAACCCATGGCAAAGGCAAGTTGTATGGGTCTGTTACTGGAGTGCCTGATCATGAGTTTCTTCTGATTGCTTGCAACAACTCCTCTGTGAAGCGAGGTAATGGGGGAGGTTCTAATGCATTATCCTCTAGATGTGCTGGTTCTGAGATCATATATCTATCTGACCCAGAGATTTCTCATAAAATTACATCTATTGCTGTCAGCTGTTGCACAATTATTGCTGTAGGCGGTCGTGTGGATTGGTTTGTTGTAATATCATCCTTTTTCAGTTTGCCTGCTTCTATTACTAAAGATGCAGATGATACTAGTATTTCAAAGAGGGAACAAGATATCTCTTACACGACTTGTTTTGTTCTCAGCTTGATTGACATTGCTTTGAGTTATGAGCCCTTTATGAAAAATCTTTTTGGTCAGAGTGAGGTCCATAATTCCGTGTCTGGCTTTTCTTGCATCAAAGAAGATATGGGGGAACAGTGTGTTTCTTGTCTGTTGGCTGCATCCAGCTTGACTCTTTCAAGTTCATCTATGGCAGACTCAGTTGAAAGTGTTTTTCATATTAGAGTGCAAGACCTCGGGCTTTTGCTTCATTTAATTTCAAAGCTTGATTCTCTCCCAGACACTTACAGTGTAGAGCAACTTCAAAAGTCCGGGTATGTTAAAGTTGCTCAGGAGGCTTTTCTGGAGGCAATTTTGAAAACCAACTGTGCTAGTGGTCTTCTTTGGGAACTAAAATTATCTAAATCTCACCTTAATGTGGAAACTTGCTATGATACAACTGCTGCTCTGATTCGTCTGGCTGCTCAACTTCAGCTATTGTTTGCCCCTGATGTTGAGGAGTCCATTGTGCATTTGCAGAATAGATGGGATAATGTTCAACAGGCACAGCAGAGCGATGCATTTAATAATGAAAGCAAGCCTCTCAGACATGATACGGCGACTTCAACTTCTGAGCAGTGCTCTCCAAAAACATATTCAAAGGATGGAGCTAGTATAGCTGGTTTGATGGATGAAATATGTGAAGATGCATTTCAAGTAAATGACAATAATGCATGGCAATCATATTCTTTTGAATCAGGATTTTACATTCCACATGATAGAAGCAGCTTAGTTGAGGTTGGTAAGATGAATTTGGATGAACCTGAAGTTCTCTCTCCTGAACTAAAGTTGCCTGAGTCAGTGCCTGTATTAGGACCAGAAGGTAGTCACACTTCATTTCTGCAAGACGGATGCTTTCCAAAGATTATAGAAAGCTATTGTTTGTCTGACTTACGACCTCTCTCAGAGCTATCCATAGATATACATTCTAAAGAGCTTTCTAAAATCAAGCTGAGGAATGTGTCACATCGAGAGATTGAAAGAGGAAGTGGTGGATGGTATGAAGGCAACTCTTCTAAAGTATTAGAAAATCACATTTCAGACGAAAATGGAAAAACTGGACCAGTGAAGGCCGCACATCATGGCCTACTTCATTTTAATGACTTCCCACCCCACAGCGAGACTTGTGGACGTGTAATTTTAAAAAACCTTGATATAAGATGGAAAATGTATGGCGGTTCTGACTTGGTTGATTCGGGGAAAAATGGACAACATTCTGGGCGGAACACGTCTGTTTGCTTGGAACTTGCATTGTCTGGGATGAAATTTCAGTATGATGCATTTCCAGTTGGTGGACTACATGTATCTAAGATGTCTCTGTCAGTTCAAGATTTTTTTCTTTATGACAGAAGCCAAAATGCACCTTGGATACTGGTGCTAGGATATTATTACTCAAAGGGCCATCCTAGGGAATCTTATTCAAAAGCATTTAAGTTGGACTTGGAGGCAGTTAGACCAGATCCTCTAACTCCCCTTGAGGAGTACAGGTTAAATGTTGCTTTTCTACCTATGCTATTACATCTACATCAGTGCCAGCTCAATTTTCTTGTTGATTTCTTTGGAAGGAAAAACCCATTAAATGACCACTTTCCTAATAATTGTCATGATTCGGAGGGTTCAAAATCATTTACTGAGAAAAGTAAAGATCATGCATGCCATTCAATCACACAAGAGGCATTGCTTCCTTACTTCCAGAAACTAGATATACGGTCTATTATTGTTCGTGTGGATTACAGTCCTAATCATGTAGATCTAGCAGCATTAAGGTGTGGGAAATATGTAGAACTTGTAAATCTTATCCCTTGGAAGGGTGTCGAGCTTAACCTGAAACACGTTCATGCTTCTGGCATCTATGGTTGGAACAGTGTTGGCGAAACAGCTTTAGGGGAGTGGCTGGAAGATATATCTCAGAATCAGATTCATAAAATACTGCGGGGGCTTCCCACTGTACGATCATTAATTGCAGTTGGGACTGGTGCTGCTAAGCTGATTTCGTCACCAGTAGAGAACTACAAGAAGGAGCGGAGAGTGATCAAAGGTTTGCAGAGAGGTACAATTGCATTTCTTAGAAGCATTTCACTTGAAGCTGTTGCACTTGGAGTTCATCTAGCTGCTGGAGCACACGACTTTCTTGTCCAAGCAGAATATAGTCTTTCAAGCATACCTTCTTCAGTTGCTTTGCCTGTAAAAGATAAATCAAAGACTGGCATTCGATCTAATCAACCTAAGGACGCCCAACAAGGAATTCAACAGGCTTGTGAGAGTCTCAGTGATGGCCTGGGTAAATCTGCTTCGGTGTTAGTTCAGAACCCCTTGAAAAAGTTCCAGCGCGGTTCAGGTGCAGGACCTGCCTTGGCTTCTGCTGTTCGAGCAGTTCCTGCAGCTGCCATAGCTCCCGCTTCGGCCTGTGCAAGTGCTGTACACTATGCTCTTCTTGGATTTAGAAATAGCCTTGATCCTGAACGCAAAAAGGAGTCCATGGAGAAATATTGTCCAACACAACCCTGGGAAGAAGACTGA	5922	0.4086	MFPWKIAKSAEAMFSRWALKRVCKFFLKKKLGQFILGEIDLDQLDVQLSQGTIQLTDLALNLDFINAKLGRTSSIMVKEGSIGYLLVKMPWSGKGCEVEVNELELVVSPCVNKTSTTGDEACGSSDVDKDDCEIKYSSSKTNLETADDAMKSVSMDVHEGVKTIANMIKWLLTSFHVKITNVIVAFDPFLENDEGREIDCHGTLVLRVSEIQCGTSLSEDTESKDDLLGISRLTNFVKFDGAVLEILKIDNEKNQLPGPGLGSTRSTCPVMTGKQGGFGGNIKLSIPWKNGSLDICKVDADVCVDPVVLRFQPGSIEWLLKSWGTLKNLNKDANCKNHNLRGPSHLNSALLNPSTTSVSIANVTGEMITGHGSLRADCASLTQPEDPESPEALLPAANLISDWVPFSTHMNLKDGFQEPDFGASVDQFFECFDGMRNSQSALGSSGMWNWTCSVFSAITAASSLASGSLHLPSEQHHMETNLRATFSGVSIVLSFCDDEQSCFYKSKIGNTVGSQIDYLGAECNEIVVALKVCPQVMTFDGTVKRVEVANFLNIGSNAENQSALVGHLQTKVLDALPLSTSYNLYSDSLIGPVATDFPFGNKDFLLKVTLFKTSGVTNCKFTVQSSSSDGCVTGMTSFSLNLPPFTFWVIFSVINVLTNLLKEIGKSLEVHNKAEEIFSEASDEKCGSSQNDTKQSFSPCATSFSTTECLHGDISISSARVILCFPFDKAGDRAASFSWEKLIALDFSSSSPLNKGCTSDGSQTSSASSKKRFPSVAAQSLQLNFCDLDVYLITSTSSDSGRISSNDVKNEKFYGSCFLSIARRRGSFSVFRVVWQEGQVTGPWIAKKARLFVNSEQSKGKDDIAGRGYEYASASTVKDLEDWKSQTQQEMILSSSLLMHVHLSQVVINMNDSLYKGIYELLLQMLNATACETSQEANVDKHSPVSQSSVFLECDSVEILISRDTSESIESSIKSELPGQWHQFKLKVQGFELLSVTNTGGVKAASFFRLTHGKGKLYGSVTGVPDHEFLLIACNNSSVKRGNGGGSNALSSRCAGSEIIYLSDPEISHKITSIAVSCCTIIAVGGRVDWFVVISSFFSLPASITKDADDTSISKREQDISYTTCFVLSLIDIALSYEPFMKNLFGQSEVHNSVSGFSCIKEDMGEQCVSCLLAASSLTLSSSSMADSVESVFHIRVQDLGLLLHLISKLDSLPDTYSVEQLQKSGYVKVAQEAFLEAILKTNCASGLLWELKLSKSHLNVETCYDTTAALIRLAAQLQLLFAPDVEESIVHLQNRWDNVQQAQQSDAFNNESKPLRHDTATSTSEQCSPKTYSKDGASIAGLMDEICEDAFQVNDNNAWQSYSFESGFYIPHDRSSLVEVGKMNLDEPEVLSPELKLPESVPVLGPEGSHTSFLQDGCFPKIIESYCLSDLRPLSELSIDIHSKELSKIKLRNVSHREIERGSGGWYEGNSSKVLENHISDENGKTGPVKAAHHGLLHFNDFPPHSETCGRVILKNLDIRWKMYGGSDLVDSGKNGQHSGRNTSVCLELALSGMKFQYDAFPVGGLHVSKMSLSVQDFFLYDRSQNAPWILVLGYYYSKGHPRESYSKAFKLDLEAVRPDPLTPLEEYRLNVAFLPMLLHLHQCQLNFLVDFFGRKNPLNDHFPNNCHDSEGSKSFTEKSKDHACHSITQEALLPYFQKLDIRSIIVRVDYSPNHVDLAALRCGKYVELVNLIPWKGVELNLKHVHASGIYGWNSVGETALGEWLEDISQNQIHKILRGLPTVRSLIAVGTGAAKLISSPVENYKKERRVIKGLQRGTIAFLRSISLEAVALGVHLAAGAHDFLVQAEYSLSSIPSSVALPVKDKSKTGIRSNQPKDAQQGIQQACESLSDGLGKSASVLVQNPLKKFQRGSGAGPALASAVRAVPAAAIAPASACASAVHYALLGFRNSLDPERKKESMEKYCPTQPWEED*	1974

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g2863	1973	MobiDBLite	consensus disorder prediction	1309	1330	-	-
	Psa7g2863	1973	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	13	1964	IPR026886	GO:0006914\|GO:0030242
	Psa7g2863	1973	Pfam	N-terminal region of Chorein or VPS13	19	115	IPR026854	-
	Psa7g2863	1973	Pfam	Autophagy-related protein C terminal domain	1872	1964	IPR015412	-
	Psa7g2863	1973	Pfam	Autophagy-related protein 2 CAD motif	1216	1285	IPR026885	-
	Psa7g2863	1973	PANTHER	AUTOPHAGY-RELATED 2, ISOFORM A	13	1964	IPR026849	GO:0006914

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g2863	Psa-Chr7	205490785	205503480	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g2863	K17906		-	gmx:100805552	2893.6

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g2863	7	205490785	205503480	Psa7g2863	7	205490785	205503480	ECH