Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2347 ATGGCTTCTTCATGGTTTATCAAACTTGCTTTCAAATGCCTTCATCATATAGCATGGCCTCTTTTTGCTCTCGTGTTTCCTATGTGTGCTTCCATACAAGCAATTGAGACTGATTCTTATACAGAAACTAAGAATTTGATCTCATATTGGACACTTCTTTCATTGATATACCTCTTTGAGTATGTTTTTATCAAGCTTCTTCTATGGTTTCACCTCTGGCAGTACATTAAGCTAATGATCGTTTTCTGGCTTGTGACGCCAGACTTTGGACGGGCTTCTTATGTTTATAATAACCTTGTTCGCTTGATGAAACCTCAAATAGTCACATACTGGAGGAAGTGTTTTGTTGAGAGAGATAACTTTTTAATGCATGCAGAGAGGTATTTGAAAGAGAATGGAACTGAAGCCTTAGAGAAACTCATTACTAGCAACACAAATGAAGAAAGAGTCCAAATTGAGCACAGAGACATCAAAGATTTGGAGGCTATTGAGGAAAAAGAAATTTCTGTTGCCAAGAATGAAGAAATACAGACAGAGAACAAAGACATCAAAGATTTGGAGGCTATTGAGGAAAAAGAAATTTCTGTCGCCAAGAATGAGGAAATACAGACAGAGAACAAAGACATCAAAGATTTGGAGGCTATTGAGAAAACAGAAATTCCTGCTGCCAAACAAAGAACCTATGCTAATATTGTGGCGAGTCAAAAAGCATCATCATCAGCCATAGTAGAAACCAAAGGAACAGCTGAAGGTGATAATGCTGGTGGAGAGGTTGTTCAGAGTTCGACTTGTACAGAGAAGGAAGTGCAGAGAGAATGGACATGTGCTTTATGTTTGGTAAAAGTTACATGCGAGAAAACCTTGAATTCACACCTTAAGGGGAAGAAACACAGGGCTGCTTGGGAAGAAGCTTTGAAGTTAAAGTTAAAGATGCAACCTGGTCTGCAGAAGAAACTGATAGAACCAATAAGGATGACTTTCATCTTCTTTTTTGCTCTTGTTGCCATGGTCGATACTTCACCTGCTGCAACAGTTGGATCTCTTTCTCTGTCTTTGCCTGATATTCTTGCTAACACTACTAATTCATCTTCATCACATCACTTTGAACCAATGCTTTCGATCAAACTTCAAGACAATAACTATCACATGTGGAATCAACAACTTAGTGTTGAATTGAAATCCGTGAAGAAAGACAACAAATCCATCACTGAATGTGTTCTTTGCGTTAAAGCTGTTGCAAACTCGCTTTTGGCAGTTGGAGACTCAATCATAGAGGAAGATCAAATTGATTCCATACTGATGGTTGCTCAATTTGACAAATTCAGGCAGGAACTAATTGTCTTGAATATTTCTTCTAGTATGGCTCACACAAATTCACAAATAGGTGGTATGTATGAAAACTCTGCAGGAAATTGTGGCAGGGGATAG 1428 0.3831 MASSWFIKLAFKCLHHIAWPLFALVFPMCASIQAIETDSYTETKNLISYWTLLSLIYLFEYVFIKLLLWFHLWQYIKLMIVFWLVTPDFGRASYVYNNLVRLMKPQIVTYWRKCFVERDNFLMHAERYLKENGTEALEKLITSNTNEERVQIEHRDIKDLEAIEEKEISVAKNEEIQTENKDIKDLEAIEEKEISVAKNEEIQTENKDIKDLEAIEKTEIPAAKQRTYANIVASQKASSSAIVETKGTAEGDNAGGEVVQSSTCTEKEVQREWTCALCLVKVTCEKTLNSHLKGKKHRAAWEEALKLKLKMQPGLQKKLIEPIRMTFIFFFALVAMVDTSPAATVGSLSLSLPDILANTTNSSSSHHFEPMLSIKLQDNNYHMWNQQLSVELKSVKKDNKSITECVLCVKAVANSLLAVGDSIIEEDQIDSILMVAQFDKFRQELIVLNISSSMAHTNSQIGGMYENSAGNCGRG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2347 475 Pfam TB2/DP1, HVA22 family 27 101 IPR004345 -
Psa7g2347 475 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 311 - -
Psa7g2347 475 SUPERFAMILY beta-beta-alpha zinc fingers 255 303 IPR036236 -
Psa7g2347 475 SMART ZnF_U1_5 270 304 IPR003604 GO:0003676|GO:0008270
Psa7g2347 475 PANTHER HVA22-LIKE PROTEINS 1 311 IPR004345 -
Psa7g2347 475 Pfam Zinc-finger of C2H2 type 273 297 - -
Psa7g2347 475 Gene3D Classic Zinc Finger 257 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2347 Psa-Chr7 167195121 167198177 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2347 - - mtr:MTR_4g093510 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2347 7 167195121 167198177 Psa7g2347 7 167195121 167198177 ECH