Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2346 ATGGCTTCTTCATGGTTTCTCAAACTGGCTTTTAAATTCCTTCATCATTTCGCATGGCCTCTTGTTGCTCTGGTGTATCCTATGTGTGCTTCCATTCAAGCAATCGAGACTGATTCTTATGCAGAAACTAAGAATTTGATCTCATATTGGATACTTCTTTCATTCATTTACCTCTTCGAGTATGCTTTTACCAACCTTCTTTTACGGTTTCAGGTCTGGCTCTACATTAAGCTAATGATAATCTTGTGGCTCACCATACCAGACTTTGGACGAGCTTCTTGTGTTTACAATAACCTTATTCGCTCCGTGAAACTGCAAATAGTCACATGGAGGTTAAATAACTACCGGATGAAGTGGTTATTGGAGAAAGATGACTTTTTAATGCCTGCAGAGATATATGTGAAAGAAGTTGGAACTGAAGCATTAGAGAAACTCATTGCTAGCAAGGAGTTTCTTGTGCAGACAAATGTAGAAAGACCGGAAACAAACATCAAAGATTTGGAGGCTATTGTTAAAAAGGAAATTCCTGCAACCCAACAAGATATTTCTGTCATATCTGAAACTGTGCCAAGTCAAAATGCATCAGCAGCCACAGTAGAAAACAAAGTTCCTCAGAGTTCTACTTCTACACGAAAGGAAGCACAGAAAGAGTGGAATTGTGCTTTATGTATGGTAACAACATCGAGCGAGATAACCTTGACTTCCCACCTAGGTGGAAGGAAACACAGGGCTGCTGTTGAAGCTTTGATAGCAAAAAAGCAACCTAACTTGCAGAAGCAAAACTATGCAAAAGCGACAAACGAAATCACAGCTACCAACAGTAAAGAAACACCAAAAACAAATGGAAAAAGACTACAACCAGAACACACAGAAATCAAAGATTTGGACACTATTGCAAAAAAAGAAATTCCTGCAACCAAGCAAGGAACCTCTGCTAATATTGCGGCAAGTCAAAAGGCATCATCTGCCATATTAGAAACCAGTGGAACATTGGGGAGAGACACAGCTGGTGGTGAAGTTTCTCAGAGTTCCGCTGCTGCACAGAAGGAAGTGCAGAAAGAGTGGGCTTGTGCTTTATGTTTGGTGACAACATCGAGCGAGACAACCTTAAATTCGCACCTCAGTGGAAGGAAACACATGAATACTATTGAGGCATTGAAAGCAAAGAAGCAACCCACCCTGGAAAAGAACCTTTGTGAACCATTTAGGATGGTTAATTCGAAAATAATATGTAAAGTTTGTAATATTATGCTTCCAAGTGAGGAGTACATGGCCTCTCACATAAAAGGGCCTCTTGTTGCTCTTGTGTATCCTATGTGGGCTTCCATTCAAGCAATCGAGACTGATTCCAATGCAGAAACTAAGAATTTGATCTCATATTGGATACTTCTTTCATTGATATACCTCTTTGAGTATGCTTTTATCAACCTTCTTCTATGGTTGCGGCTCTGGCTGTACATTAAGCTACTGATCATCTTCTTGCTCACCATACCGGACTTTGGACGAGCTACTTACGTTTATAATAACTTTATTCGCCCCGCGAAATTGCAAATAGTCGTCGCATGGAGATTTAATAAGTACTGGAAGAAGTGTTTTGTCGAGAAAGATGACTTTTTAATGCATGCAGAGAGGTATATGAAAGAAAATGGAACCGAAGCCTTAGAGAAACTCATTGCTAGCAAGACAAATGGAGAAAGAGTCCATACTGAGAACCTAGACATCAAAGATTTGGAGACTATTGAGAAAAGGGAAATTCCTTCTACCAAGCAAGATATTCCTGTCATGCATAAAGTTGGGCCGGGTCATAATGCATCATCAGCCATAGTGGAAACCAAAGGAACATCAGAGAGTGACAGAACTGGTGGAGAGGTTCCTCAGAGTTCTTCCACACAGAAGCAAATGCAGAAAGAGTGGACTTGTGCTTTATGTTTGTTCATGTATGAGTCAATTCTACTTGTTTCTGTTACAGAACATTTAGAGTACTTAATGAAGAAGCTTCTTGTGCAGACAAATGGAAATCAAAGACTTGAAATAGACAACAAAAACATCAAAGATTTGGAGGCTATTGAGAAAAAGGACATTCCTACAACCAAGCAAGTAAGGGTTCATTCATTCATATGTTAG 2124 0.3969 MASSWFLKLAFKFLHHFAWPLVALVYPMCASIQAIETDSYAETKNLISYWILLSFIYLFEYAFTNLLLRFQVWLYIKLMIILWLTIPDFGRASCVYNNLIRSVKLQIVTWRLNNYRMKWLLEKDDFLMPAEIYVKEVGTEALEKLIASKEFLVQTNVERPETNIKDLEAIVKKEIPATQQDISVISETVPSQNASAATVENKVPQSSTSTRKEAQKEWNCALCMVTTSSEITLTSHLGGRKHRAAVEALIAKKQPNLQKQNYAKATNEITATNSKETPKTNGKRLQPEHTEIKDLDTIAKKEIPATKQGTSANIAASQKASSAILETSGTLGRDTAGGEVSQSSAAAQKEVQKEWACALCLVTTSSETTLNSHLSGRKHMNTIEALKAKKQPTLEKNLCEPFRMVNSKIICKVCNIMLPSEEYMASHIKGPLVALVYPMWASIQAIETDSNAETKNLISYWILLSLIYLFEYAFINLLLWLRLWLYIKLLIIFLLTIPDFGRATYVYNNFIRPAKLQIVVAWRFNKYWKKCFVEKDDFLMHAERYMKENGTEALEKLIASKTNGERVHTENLDIKDLETIEKREIPSTKQDIPVMHKVGPGHNASSAIVETKGTSESDRTGGEVPQSSSTQKQMQKEWTCALCLFMYESILLVSVTEHLEYLMKKLLVQTNGNQRLEIDNKNIKDLEAIEKKDIPTTKQVRVHSFIC* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2346 707 Pfam TB2/DP1, HVA22 family 27 102 IPR004345 -
Psa7g2346 707 Pfam TB2/DP1, HVA22 family 438 513 IPR004345 -
Psa7g2346 707 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 245 396 - -
Psa7g2346 707 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 261 - -
Psa7g2346 707 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 431 645 - -
Psa7g2346 707 SUPERFAMILY beta-beta-alpha zinc fingers 210 254 IPR036236 -
Psa7g2346 707 Pfam Zinc-finger of C2H2 type 410 430 - -
Psa7g2346 707 Pfam Zinc-finger of C2H2 type 355 379 - -
Psa7g2346 707 Pfam Zinc-finger of C2H2 type 218 242 - -
Psa7g2346 707 SMART ZnF_U1_5 215 249 IPR003604 GO:0003676|GO:0008270
Psa7g2346 707 SMART ZnF_U1_5 352 386 IPR003604 GO:0003676|GO:0008270
Psa7g2346 707 MobiDBLite consensus disorder prediction 267 289 - -
Psa7g2346 707 Gene3D Classic Zinc Finger 338 387 - -
Psa7g2346 707 Gene3D Classic Zinc Finger 191 248 - -
Psa7g2346 707 SUPERFAMILY beta-beta-alpha zinc fingers 338 391 IPR036236 -
Psa7g2346 707 SMART c2h2final6 218 242 IPR013087 -
Psa7g2346 707 SMART c2h2final6 355 379 IPR013087 -
Psa7g2346 707 SMART c2h2final6 409 429 IPR013087 -
Psa7g2346 707 MobiDBLite consensus disorder prediction 611 631 - -
Psa7g2346 707 PANTHER HVA22-LIKE PROTEINS 431 645 IPR004345 -
Psa7g2346 707 PANTHER HVA22-LIKE PROTEINS 245 396 IPR004345 -
Psa7g2346 707 PANTHER HVA22-LIKE PROTEINS 1 261 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2346 Psa-Chr7 167179448 167190326 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2346 - - mtr:MTR_4g093280 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2346 7 167179448 167190326 Psa7g2346 7 167179448 167190326 ECH