Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2313 ATGTGGGAATCAGAAGGTGTAACACCAAATGGAAGGGAATATGGAGGTGATGTTCTTACCTCAACCAAACATGGTGTTAAGATTGAAGGCTTTTATCAAAGAGCCAACTCTTGGTATGTTTCTGCTGATATTCCAAGTGATCTTCATGTCCAAATTGGTGAAGCCAACTTCTACTTGCACAAGTATCCTTTGCTATCTAGAAGTGGAAAGCTGAACAGAATGCTATATGATTCTCGCGAGCCCGAGTTGAATAAGATAGCCATGGATGATCTACCGGGAGGGCCTGAAGCTTTTGAACTTGCAGCCAAATTCTGCTATGGAGTTGCCATTGATTTGACAGCAAGCAACATTTCTGGCCTAAGATGTGCTTCTGAGTATCTTGAAATGACTGAGGATCTAGAAGAAGGGAATCTTATATTCAAAACCGAAGCTTTTCTTAGCTATGTTGTTTTGTCTTCGTGGAGAGACTCTATCGTCGTGTTGAAAAACTCGGAGAAGTTGTCACCGTGGGCAGAAAATCTTCAAATCGTTCGAAGATGCAGCGAGTCTATCGCTTGGAAAGCTTGTGCTAATCCAAAAGGAATAAGGTGGTCGTATACCGGAAGGGCACAGAAAGTTTCAAGCCCGAGTTGGAATGAAATGAAAGACTCGAGCCCGAGTAGGAACCAACTGGTTCCTCCTGATTGGTGGTTTGAAGATGTTTCGATCCTTAGGATTGATCACTTTGTCAGAGTCATTACTGCTATTAAGGTGAAAGGTATGAGATTCGAACTGATCGGCGCTGGGATAATGCATTATGCAACTAAATGGCTACCAGGATTGGCGGCGAACGAGACTTCAACCCAAGGAGAGGAAACAAGCATCAACAGTAGTTGTAGTTTTAGTAGCGGCGGCGATAATGGTAGCTGGAAAGGTGGACTTCATATGGTTGTTGCTGGAACTAGAGATGAAACTTCAAGTCTTCAAACTAAAGATCAAAGGATGGTTATTGAAAGTCTCATCAGCATAATTCCGCCGCAGAAAGACAGTGTTTCGTGTAGCTTCCTTCTCAGGCTTCTGAGAATGGCAAACATGTTAAAGGTTGCGCACGCATTGATTACTGATTTAGAGAAAAGAGTTGGAATGCAATTCGAGCAAGCTACACTTTCCGATCTTCTAATTCCTTGCTACGATAAAAGCGAGACTAAGTTTGATGTGGATCTTGTTCAGAGGCTTTTGGAGCATTTTCTTATTCAAGAACAAACTGAAGGTTGTAGTCCAAGTAGACAAACCTTTTCTGATCACAAGCATGTTGGAAGTAACTTGAATGCCAAGGCAAGAGTGGCAAGACTTGTGGACAGTTATCTTACAGAGGTATCTAGAGATCGAAACCTTTCGTTGACAAAGTTTCAGGTTCTCGCCGAAGCTTTACCTGAATCGGCTCGAGTTTCTGATGATGGACTATACCGAGCTATCGATTCATATCTCAAGGCACATCCTACGCTAACCGAGCACGAAAGGAAACGGCTCTGTCGCGTAATGGATTGTCAAAAACTCTCAATCGACGCGTGCATGCACGCCGCTCAAAACGAAAGGCTTCCATTAAGGGTAGTAGTGCAAGTTCTATTCTCTGAGCAAATCAAGATAAGCAATGCACTAGCCAACAACAGTTCTCTAAAAAGCGGCAGTGGAGGCGGAGGCGGAGGCGTTGAATCTCAGTACCAACCAATGGTAACAAACAGGAAGACGCTTCTCGAAGGGACGCCGCAATCGTTCCAAGAAGGATGGACAACAGCTAAGAAAGACATTAACACACTAAAGTTTGAACTCGAGAGTGTTAAAACAAAGTACTTGGAGCTTCAACATGATATGGAAAATCTGCAGAAGAATTTTGATAAAGTGATGAAGCAAAAACACACATCAGCTTGGACTAGTGGGTGGAAGAAACTGAGCAAACTCACAAAAATCACAAATGGAGAGAATCATGATATTGGTAATCACATTCCAACTTCTGAAGAACAGATCAAAAAGAATGCTAGAAGGTGGAGAAACTCAATATCTTGA 2043 0.4268 MWESEGVTPNGREYGGDVLTSTKHGVKIEGFYQRANSWYVSADIPSDLHVQIGEANFYLHKYPLLSRSGKLNRMLYDSREPELNKIAMDDLPGGPEAFELAAKFCYGVAIDLTASNISGLRCASEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIVVLKNSEKLSPWAENLQIVRRCSESIAWKACANPKGIRWSYTGRAQKVSSPSWNEMKDSSPSRNQLVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAGIMHYATKWLPGLAANETSTQGEETSINSSCSFSSGGDNGSWKGGLHMVVAGTRDETSSLQTKDQRMVIESLISIIPPQKDSVSCSFLLRLLRMANMLKVAHALITDLEKRVGMQFEQATLSDLLIPCYDKSETKFDVDLVQRLLEHFLIQEQTEGCSPSRQTFSDHKHVGSNLNAKARVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARVSDDGLYRAIDSYLKAHPTLTEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFSEQIKISNALANNSSLKSGSGGGGGGVESQYQPMVTNRKTLLEGTPQSFQEGWTTAKKDINTLKFELESVKTKYLELQHDMENLQKNFDKVMKQKHTSAWTSGWKKLSKLTKITNGENHDIGNHIPTSEEQIKKNARRWRNSIS* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2313 680 Gene3D Potassium Channel Kv1.1; Chain A 32 138 IPR011333 -
Psa7g2313 680 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 3 680 IPR029959 GO:0016567
Psa7g2313 680 CDD BTB_POZ_NPY3-like 37 141 - -
Psa7g2313 680 Coils Coil 603 630 - -
Psa7g2313 680 ProSiteProfiles BTB domain profile. 46 114 IPR000210 GO:0005515
Psa7g2313 680 SUPERFAMILY POZ domain 36 131 IPR011333 -
Psa7g2313 680 PANTHER OS12G0117600 PROTEIN 3 680 IPR043454 -
Psa7g2313 680 Pfam NPH3 family 228 517 IPR027356 -
Psa7g2313 680 ProSiteProfiles NPH3 domain profile. 228 541 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2313 Psa-Chr7 164143428 164164886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2313 27 626 EF-hand Containing Proteins AT3G44820 35.091 1.40e-123 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2313 - - gmx:100810791 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2313 7 164143428 164164886 Psa7g2313 7 164143428 164164886 ECH