Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2312 ATGGCTTCAAGTTCAACAGTTCCTCCTGAAGTTACCAAAAAATTCAAAAATAGAGTAACTAGTTTCAAAAGTGTGAAAACATTATCAGAATCTCCAGATTTCAACTCTATTCCATTCTCATACAAATTCATCACCAACCCACATGACAAAAATGAAATAGTAGCAGACCCAGATGACAATGATCCAATCCCAGTTATTGATTATTCTCTTCTGGCCACTGGTGCACCTGATAAACGAACCAAAACTATTCGTGACATAGGCAAGGCTTGTGAAGAGTGGGGATTCTTCATGCTAATCAATCACTTTGTTTCAAAGAGCCTCGTGGAGAAAATGGTTGATCAAGTTTTTGCTTTCTTCAATCTTAGAGAGGAAGAGAAGCAAGAGTATGCAGGTAAGGAAGTAGTGGATCCAATAAGGTATGGAACCAGCTTCAATGCTTCAGAAGACAGAGTCTTGTTTTGGAGGGATTTCATTAAAATCATCGTTCATCCTGAGTTTCACTCACCGGTCAAGCCTTCTGGATTCAGGGAAACTTCGGAAGAGTACAGTAGAAGAACATGGAAATTAGGAAGGGAACTACTGAAAGGAATATCAGAAAGCTTAGGATTGGAACTCAACTATATAGACAAAACAATGAATCTAGATTCTGGTTTGCAAATTTTGGCAGCAAATCTTTATCCTCCTTGTCCTCAACCCGAACTTGCGATGGGAATGCCACCGCATTCTGATCACGGCCTCTTGAATCTCCTCATACAGAACGGAGTTAGTGGCCTTCAAGTTCTTCACAAGGGCAAGTGGATCAATGTCAGTTCCACTTCAAACTGTTTCTTGGTCCTTGTGTCTGATCATCTTGAGATTATGAGCAACGGGAAGTACAAAAGTGTAGTACATAGAGCAGCCGTGAGCAATGGAGCAACTAGAATGTCATTGGCAACGGTTATTGCACCATCGTTGGAGACTGTGGTTGAACCAGCTTCAGAGCTACTAGACAATGAAAGAAATCCAGCAGCATATGTTGGGATGAAACACATAGATTACATGGAACTTCAACGAAGTAACCAGCTTTATGGGAAGTCTGTGCTTAACAAAGTGAAAATCTGA 1101 0.4069 MASSSTVPPEVTKKFKNRVTSFKSVKTLSESPDFNSIPFSYKFITNPHDKNEIVADPDDNDPIPVIDYSLLATGAPDKRTKTIRDIGKACEEWGFFMLINHFVSKSLVEKMVDQVFAFFNLREEEKQEYAGKEVVDPIRYGTSFNASEDRVLFWRDFIKIIVHPEFHSPVKPSGFRETSEEYSRRTWKLGRELLKGISESLGLELNYIDKTMNLDSGLQILAANLYPPCPQPELAMGMPPHSDHGLLNLLIQNGVSGLQVLHKGKWINVSSTSNCFLVLVSDHLEIMSNGKYKSVVHRAAVSNGATRMSLATVIAPSLETVVEPASELLDNERNPAAYVGMKHIDYMELQRSNQLYGKSVLNKVKI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2312 366 SUPERFAMILY Clavaminate synthase-like 52 353 - -
Psa7g2312 366 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE 19 366 - -
Psa7g2312 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 167 IPR026992 -
Psa7g2312 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 366 - -
Psa7g2312 366 Pfam 2OG-Fe(II) oxygenase superfamily 221 314 IPR044861 -
Psa7g2312 366 Gene3D - 20 355 IPR027443 -
Psa7g2312 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 316 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2312 Psa-Chr7 163858421 163859700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g2312 49 366 Glycosyltransferase AT5G59530 32.923 4.50e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2312 - - lja:Lj4g3v0365660.1 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2312 7 163858421 163859700 Psa7g2312 7 163858421 163859700 ECH