Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1980 ATGACTTCCACCATTCCCACTTCACCATCATTCTCCATCCTCTCCTTCAATCCCACAATCACCAATACTCCTTCACAGTTCCCTCCTAATCTCCCTCTCCGCCACCGTCGACTCACCGTCAGAGCCCACTCTTCCAACTCTCCCGTTCTTCACCACCTCAAAAACATCGCCGGAGCAGCAGTCTTCACCGCCGCAACCGTTGCCGCCGCCCTCACATTTTCATCTTCCCCCGCCAGAGCCGAACCACCGCCTACACTCACCGAAGTCCTCAACGAAACTGAAACCGAAACCGAAACAGACGCAGTTCTCGTCGACACCGGAATCGAATCGGACGCACTTCTCGCTGACACCGACACCGGAACCGAAACAGACGCAGTTCTCGCCGACTCCAACACCCGAACAACATCGCCTCTGTACGATGAATCTTCATCACCGGAAGTTCTGAAGTCTCTTCTTCAGCAGAAGCTCGAATTCGGGGAGGACGAAGAGGCATTAAAGATCCTCAAACTCTTGATCTCATCACAACCAGAGATAACTGACTGGAAATTCACCGCAGCAAGGTTAACTACCGAAATAGGAGATACTGATAGCGCTCGAACTTTCTACGAGGATATCCTAAAGTCAAACCCGCTTTCTTTCGAAGCGCTTTTTGAAAACGCGCTTTTAATGGACAGTTGCGGAGAAGGGGAGGCTGTAATTGAAAGGCTTGAAGATGCTATGAGAGTTGCAGTGGAAGACAGTAAGGAAAAGGAAGCGAGGGATGTGAAGTTGATAATGGCTCAGATTCTGTTTCTACAGAAGAATGTTGATGAAGCTTTGGGTATCTATGAGGTATTAATCAAAGAAGATCCTAATGATTTTAGACCTTATTTTTGCAGGGGAATGATTTATACATTGCTTGATAAGAATGATGAGGCTAAGGAGCAATTTGCAAAGTATAGGGAATTGTCACCTAAGAAGTTTGAGGTTGATGGTTACTTGAGAACACCTTTGTCAAAGATCAAAGATTTTGGTACTCATCAAAGCTAG 1029 0.4684 MTSTIPTSPSFSILSFNPTITNTPSQFPPNLPLRHRRLTVRAHSSNSPVLHHLKNIAGAAVFTAATVAAALTFSSSPARAEPPPTLTEVLNETETETETDAVLVDTGIESDALLADTDTGTETDAVLADSNTRTTSPLYDESSSPEVLKSLLQQKLEFGEDEEALKILKLLISSQPEITDWKFTAARLTTEIGDTDSARTFYEDILKSNPLSFEALFENALLMDSCGEGEAVIERLEDAMRVAVEDSKEKEARDVKLIMAQILFLQKNVDEALGIYEVLIKEDPNDFRPYFCRGMIYTLLDKNDEAKEQFAKYRELSPKKFEVDGYLRTPLSKIKDFGTHQS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1980 342 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 129 341 - -
Psa7g1980 342 SUPERFAMILY TPR-like 156 321 IPR011990 GO:0005515
Psa7g1980 342 ProSiteProfiles TPR repeat profile. 287 320 IPR019734 GO:0005515
Psa7g1980 342 Gene3D Tetratricopeptide repeat domain 92 333 IPR011990 GO:0005515
Psa7g1980 342 Pfam Tetratricopeptide repeat 257 285 IPR019734 GO:0005515
Psa7g1980 342 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 129 341 - -
Psa7g1980 342 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1980 Psa-Chr7 144872793 144875881 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1980 - - aip:107632119 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1980 7 144872793 144875881 Psa7g1980 7 144872793 144875881 ECH