Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1811 ATGTTCACAGTGAAGTCAAGTCTCTCGCTTCTCCGATCTCCGACGGTGTTTTCCGGCGGCACCGATAAGAGACACCGGAGAGTTTTTTTACGGTCACATGAACGGCGGAGAGTTCAGATTCAAGCAGCGATCAGTGGCGGGGACAGCAAGAGTCAGACTACGACGTCGTCTCCGGTGGAGAGCAAAGAGAGCAACGAGTCAGTTCCACGTGGCTCGAGTGGTGGTAGAAGCAGCGGCGAAGTGATAAATGTGAAGGCGGTTGTGACGATAAGGAAGAAGATGAAAGGTAACAATATTGTTGAAGATCGGTTGGAGTATTTCATCAATGGTGCTGGTCAGGGGATACAGATTCGGCTCGTCAGTGAAGAAATTGACCCTGAGACTAATTGTGGAAAGAGTATGGAATCCCACGTAAGAGGTTGGCTGCCGAAGCCGTCAAACATTCCATATATTGTGGAATACTCAGCTGATTTCACATTGTCAAGCGACTTTGGATCCCCTGCTGCTATTCTCATTACCAATCTTCATGCAAAGGAGTTCCATTTATTGGAAATCATCCTTCATGGCTTCACTCAAGGACCCATTTTCTTCCCAGCAAACACGTGGATTCATTCATGTAAAAACAACCCTCAAAGTAGAATCATATTCAAAAACCATGCATATTTACCATCACAAACACCACCTGGTATCAAAGATCTTCGACATGAAGACTTGCTAAGCATAAGGGGTAGTGGTAATTACCAAGAAAGGGAAAGAAAATCATATGATAGAATCTATGATTATGCTACTTATAATGATTTGGGAAACCCTGATAAAGATGAGGAACTTGTTAGACCTGTCCTTGGGGATCATGACAGACCTTATCCTCGTCGCTGTAGAACTGGAAGACCTCCGACTCGCTCCGATCCAATGTGTGAGAGTAGAATTGAAAAGCCACATCCTGTGTATGTGCCGCGCGATGAAACTTTTGAAGAAATCAAGCAGGCCACATTCTCTGCTGGAAGATTGAAAGCTGTGCTCCACAATCTTATACCTTCACTTGCAGCCACTCTATCCAATTCAGACATTCCTTTCAAATGTTTCTCGGAAATTGATAACCTCTATATTGGTGGTGTTACTTTAAGAGATGATGAGTATAAAGGGATTATGGAAAATCTCTTGGTGGGAAAAGCGATGAAACAGGTCGTAAGTGCTGGACAACGGTTGTTGAAATATGAAATCCCAGCAGTTATAAAAGGAGATAAATTTTCTTGGTTGCGGGACAACGAATTTGCAAGGCAAGCCTTAGCTGGGGTCAATCCAGTGAATATTGAACTATTGAAGGAGTTTCCCATCTGCAGCAAATTAGACCCAGCTGTCTATGGCCCTCCAGAATCAGCAATAACCAAGGAACTACTGGAGGAAGAACTTGGTGCAATGAGCTTGGAAAAGGCTATGGAGGAAAAAAGACTATTTATCATTGATTACCATGACACACTTTTGCCATTCATCAAGAAGATGAACTCCTTGCCTGGGAGGAAAGCTTATGCGTCGCGAACGATTCTCTTCTATACAAAGACTGGTATTTTGCGTCCCATAGCTATTGAGCTTTCGCTTCCTCGGACACATTCTTCCCCACAAAATAAAAGAGTTTACACAACAGGCCATGATGCCACAGCACACTGGCGTTGGAAGTTAGCAAAAGCTCATGCTTGCTCAAATGATGCTGGCATCCATCAATTAGTAAATCATTGGTTAAGGACTCATGCATGCATGGAGCCATATATAATTGCTACTCATAGACAATTAAGCTCAATGCACCCCATTTACAAGTTGCTACATCCTCATTTGCGCTATACAATGGAAATTAATGCACTTGCTAGGCAAAATTTAATTAATGGAGGGGGTGTAATTGAAGCATGTTTCAGTCCTGGAAAATATGCCATGGAGCTTAGTTCAGCAGCTTACAAGAACATGTGGAGATTTGATATGGAGTCTCTCCCAGCAGATCTTATTCGGAGGGGCATGGCAGTAGAAGACCCTTCAATGCCTTTTGGTGTAAAACTTGTGATTGATGACTACCCTTATGCTGCAGATGGACTCCTAATCTGGTCTGCCATTAAAGAATGGGTAGAATCTTATGTTGAACACTTCTATTCCGAATCAAATTCAATCGCATCCGACGTTGAGCTCCAAGAATGGTGGAGTGAAATCAAGTTTAAGGGTCACCATGACAAAAGGAATGAACCTTGGTGGCCTAAACTAGATACCAAAGAGGACCTTTCTGGCATACTTACAACAATTATATGGGTTGCTTCAGGTCAACACGCTGCTATCAATTTTGGACAATACCCTTTCGGAGGGTATGTGCCTAACCGTCCTACCCTCATGAGAAAACTTATCCCTCAAGAAAATGATCCTGATTATGAGAAGTTTATTCAAAATCCTCAGCTTTTCTTTCTATCATCATTGCCTACTCAACTTCAAGCTACCAAAGTAATGGCTGTTCAGGACACATTGTCAACTCATTCGCCTGACGAAGAGTATTTGGGACAAGTGAATCATCTGCACAATCATTGGATCAATGATCATGCAGTACTAAAATTGTTTAGTAAGTTATCTACTAGACTTGAGGAGATAGAGGAAATAATAAATGCAAGAAATAAAGATCCGCATTTGAAAAGTAGAACCGGTGCAGGTGTTCCTCCCTATGAACTGTTGCTTCCCACGTCAGGCCCCGGGGTAACTGGTCGTGGAATCCCCAACAGCATATCTATATGA 2760 0.4275 MFTVKSSLSLLRSPTVFSGGTDKRHRRVFLRSHERRRVQIQAAISGGDSKSQTTTSSPVESKESNESVPRGSSGGRSSGEVINVKAVVTIRKKMKGNNIVEDRLEYFINGAGQGIQIRLVSEEIDPETNCGKSMESHVRGWLPKPSNIPYIVEYSADFTLSSDFGSPAAILITNLHAKEFHLLEIILHGFTQGPIFFPANTWIHSCKNNPQSRIIFKNHAYLPSQTPPGIKDLRHEDLLSIRGSGNYQERERKSYDRIYDYATYNDLGNPDKDEELVRPVLGDHDRPYPRRCRTGRPPTRSDPMCESRIEKPHPVYVPRDETFEEIKQATFSAGRLKAVLHNLIPSLAATLSNSDIPFKCFSEIDNLYIGGVTLRDDEYKGIMENLLVGKAMKQVVSAGQRLLKYEIPAVIKGDKFSWLRDNEFARQALAGVNPVNIELLKEFPICSKLDPAVYGPPESAITKELLEEELGAMSLEKAMEEKRLFIIDYHDTLLPFIKKMNSLPGRKAYASRTILFYTKTGILRPIAIELSLPRTHSSPQNKRVYTTGHDATAHWRWKLAKAHACSNDAGIHQLVNHWLRTHACMEPYIIATHRQLSSMHPIYKLLHPHLRYTMEINALARQNLINGGGVIEACFSPGKYAMELSSAAYKNMWRFDMESLPADLIRRGMAVEDPSMPFGVKLVIDDYPYAADGLLIWSAIKEWVESYVEHFYSESNSIASDVELQEWWSEIKFKGHHDKRNEPWWPKLDTKEDLSGILTTIIWVASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPDYEKFIQNPQLFFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGQVNHLHNHWINDHAVLKLFSKLSTRLEEIEEIINARNKDPHLKSRTGAGVPPYELLLPTSGPGVTGRGIPNSISI* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1811 919 ProSiteProfiles PLAT domain profile. 88 217 IPR001024 GO:0005515
Psa7g1811 919 Coils Coil 463 483 - -
Psa7g1811 919 PRINTS Plant lipoxygenase signature 187 205 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 213 234 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 255 271 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 287 306 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 355 376 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 403 419 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 442 461 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 509 533 IPR001246 GO:0016491
Psa7g1811 919 PRINTS Plant lipoxygenase signature 830 844 IPR001246 GO:0016491
Psa7g1811 919 MobiDBLite consensus disorder prediction 44 77 - -
Psa7g1811 919 Gene3D - 222 326 - -
Psa7g1811 919 PANTHER LIPOXYGENASE 69 918 IPR000907 GO:0016702|GO:0046872
Psa7g1811 919 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 220 919 IPR013819 GO:0016702|GO:0046872
Psa7g1811 919 ProSitePatterns Lipoxygenases iron-binding region signature 2. 599 609 IPR020834 GO:0016702|GO:0046872
Psa7g1811 919 SMART LH2_4 38 218 IPR001024 GO:0005515
Psa7g1811 919 PANTHER LIPOXYGENASE 69 918 - -
Psa7g1811 919 Pfam PLAT/LH2 domain 153 216 IPR001024 GO:0005515
Psa7g1811 919 Gene3D PLAT/LH2 domain 75 221 - -
Psa7g1811 919 MobiDBLite consensus disorder prediction 40 77 - -
Psa7g1811 919 Pfam Lipoxygenase 230 902 IPR013819 GO:0016702|GO:0046872
Psa7g1811 919 Gene3D - 327 416 IPR027433 -
Psa7g1811 919 Gene3D - 417 548 - -
Psa7g1811 919 SUPERFAMILY Lipoxigenase 222 919 IPR036226 -
Psa7g1811 919 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 83 221 IPR036392 GO:0005515
Psa7g1811 919 ProSitePatterns Lipoxygenases iron-binding region signature 1. 572 586 IPR020833 GO:0016702|GO:0046872
Psa7g1811 919 PRINTS Lipoxygenase signature 554 571 IPR013819 GO:0016702|GO:0046872
Psa7g1811 919 PRINTS Lipoxygenase signature 572 589 IPR013819 GO:0016702|GO:0046872
Psa7g1811 919 PRINTS Lipoxygenase signature 592 612 IPR013819 GO:0016702|GO:0046872
Psa7g1811 919 Gene3D - 551 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1811 Psa-Chr7 130685060 130692032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1811 6 919 Acyl Lipid Metabolism Gene Families AT1G67560 62.432 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1811 K00454 - gmx:100814410 1484.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1811 7 130685060 130692032 Psa7g1811 7 130685060 130692032 ECH