Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1777 ATGAGAACAAGAAGAGGCTCTTGTTATCTAGAACCTGAAACAGTGATGTGTTCCTTTGGGAAGAGAAAGAAGGACATGCATATTTCCAAGGAAACTATTTTTTGTGGAAAGAGACCAAAGAAATGTTTTGAGAAAGCTTCATCGGAATATGATTTCTTCGAGGCTTTGCCAGATGATATTGTTATTTCTATCTTCTGCAGGCTAAGTTCTACAGCCACTTCACCTTCCGATTTTGTAACCGTTTTATCAACGTGTAAAAGATTCAAAAGATTAGCACTTCATTCTCTTGTGTTATCAAAAGCTTCTCCAAGAACTTTCTGCATCAGAGCGAAAAACTGGTGCGAATCGGCACAAAGATTTCTTAAACAGTGTGCTGAGGCAGGGAATGTTGAAGCCTGTTATACCTTGGGAATGATTCGGTTTTACTGTTTGCAAAACAGAGGGAGCGGTGCTTCGCTTATGGCGAAAGCTGCGATGAACTCTCACGCGCGTGCACTTTACTCGCTTGCGGTTATACAGTTTAACGGGAGCGGCGGTACCAAAAGTGATAAGGACCTCCGTGCCGGCGTTGCTCTCTGCGCCAGAGCGGCTTTTCTCGGCCATATCGACGCGCTCCGTGAGCTTGGACACTGTTTACAAGACGGTTACGGTGTGAAACAGAATATCTCCGAGGGGAGGCGGTTTCTTATTCAGGCTAACGCACGTGAACTCGCCGGCGTCCTGTCCACCGACGCCGCCGCGCGTCAGTTAGTTAACGCCAATCTTCAATCTCAACTCCGAAACGTCGCGGTGTCTGGATGTCCACTTTTGAGCGATTTTGGATGTAATGTTCCGGCGCCGGAGCCGCATCCGTCGAGTAAGTTTATGTCGGAGTGGTTTTCCGTTCGCGGCGGATCGAACGGTTCGGGTTTGAGGCTCTGTTCGCACGCGAGTTGTGGGAGGCCGGAGACGCGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTGAATTATTGCTCGCGTGCGTGTCAAGCGCTTGACTGGAAGTTCCGTCATAAGGCGGAGTGTGCTCCGGTGGAGCGGTGGCTTGATGAGGATGGTGAAGACGACGGCGAAGATGACGGCGACCGTGAGGTGATGGTTATGGAGGATAGTTAG 1143 0.4969 MRTRRGSCYLEPETVMCSFGKRKKDMHISKETIFCGKRPKKCFEKASSEYDFFEALPDDIVISIFCRLSSTATSPSDFVTVLSTCKRFKRLALHSLVLSKASPRTFCIRAKNWCESAQRFLKQCAEAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNISEGRRFLIQANARELAGVLSTDAAARQLVNANLQSQLRNVAVSGCPLLSDFGCNVPAPEPHPSSKFMSEWFSVRGGSNGSGLRLCSHASCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDDGEDDGDREVMVMEDS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1777 380 ProSiteProfiles Zinc finger MYND-type profile. 309 351 IPR002893 -
Psa7g1777 380 Gene3D - 41 98 - -
Psa7g1777 380 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 33 378 - -
Psa7g1777 380 Gene3D Tetratricopeptide repeat domain 99 261 IPR011990 GO:0005515
Psa7g1777 380 SUPERFAMILY HIT/MYND zinc finger-like 311 356 - -
Psa7g1777 380 Gene3D - 299 355 - -
Psa7g1777 380 PANTHER MYND DOMAIN-CONTAINING 33 378 IPR044508 -
Psa7g1777 380 SUPERFAMILY F-box domain 43 109 IPR036047 GO:0005515
Psa7g1777 380 Pfam MYND finger 310 351 IPR002893 -
Psa7g1777 380 MobiDBLite consensus disorder prediction 358 380 - -
Psa7g1777 380 SUPERFAMILY HCP-like 111 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1777 Psa-Chr7 128451701 128454279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1777 - - gmx:100798174 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1777 7 128451701 128454279 Psa7g1777 7 128451701 128454279 ECH