Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1378 ATGGCATCAACCATAATCGCAATGACCATGATGAACACAAAGTGCTTCAACACTCCTAGTTCACCAAAGTTCCACAACCCAACAAAACTCGTTACAAAACCCACTTCACTCCTTTCCCTCAAGAACCTTCTTCCAAAAGGAACTCCCGCAACAGAAAGCACCAAACTATCAACTTCCATAGCAGGAACAGCACTCGCAGGAGCAATATTCTCAACCCTCGGAGCCTGTAACCCCGCTTTTGCAGCACAACAAATAGCTGACATAGCTGAAGCATCATCAGATAACCGTGGTTTAGCACTTCTGTTACCTATAATTCCAGCCATAGCTTGGGTTCTGTTCAACATTCTTCAACCAGCACTTAACCAAATCAACCGTATGCGTAACACGAAAGGGGTTATCATTGGTTTGGGTCTTGGTGGATTAACAGCTTCAGGGTTTGTGTCAACACAAGATGCAATGGCTAGTGAAATTGCTGCTATTGCTGAAGCTGGTAGTGATAATAGGGGTCAGCTTCTGTTGTTTGTTGTAGCACCTGCCATTCTTTGGGTTCTCTATAATATTTTGCAGCCTGCTCTTAATCAAATCAACAAAATGAGATCAGATTGA 606 0.4323 MASTIIAMTMMNTKCFNTPSSPKFHNPTKLVTKPTSLLSLKNLLPKGTPATESTKLSTSIAGTALAGAIFSTLGACNPAFAAQQIADIAEASSDNRGLALLLPIIPAIAWVLFNILQPALNQINRMRNTKGVIIGLGLGGLTASGFVSTQDAMASEIAAIAEAGSDNRGQLLLFVVAPAILWVLYNILQPALNQINKMRSD* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1378 201 Hamap Photosystem II protein Y [psbY]. 94 128 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Psa7g1378 201 Pfam Photosystem II protein Y (PsbY) 94 126 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Psa7g1378 201 Pfam Photosystem II protein Y (PsbY) 166 198 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Psa7g1378 201 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 IPR038760 GO:0009523
Psa7g1378 201 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1378 Psa-Chr7 99685338 99687387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1378 K02723 - zju:107428525 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1378 7 99685338 99687387 Psa7g1378 7 99685338 99687387 ECH