Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1363 ATGGACCCAGCTGCTTCTCGTCCTGCTGTAGTCATCGACAATGGCTCCGGGTATACCAAGATGGGGTTTGCTGGTAATGTTGAACCTTGCTTTATTGTTCCTACCGTTGTTGCAATTAATGAGTCGTTTCTGAATCAATCGAGGAGTTCTTCCAAGGGAAATTGGATTGCACAGCATAATGCTGGTGTTATGGCTGATCTTGATTTCTTTATTGGAGATGATGCACTTTCTAAGGCTCGGTCTAGTAGCACTTATAATCTCACCTACCCGATTAAGCATGGTCAGGTTGAGAATTGGGATGCCATGGAACGATACTGGCAGCAGTGTATATTCAATTATTTGAGGTGTGATCCTGAGGACCACTATTTTCTCTTGACAGAGAGTCCATTGACAGCGCCCGAGAGTCGCGAGTATACTGGAGAAATCATGTTTGAGACTTTTAATGTGCCTGGACTTTACATTGCTGTGAACTCAGTGCTTGCTCTGGCTGCTGGCTACACAACGTCTAAGTGTGAGATGACAGGAGTTGTAGTTGATATTGGAGATGGGGCTACACATGTTGTACCAGTTGCGGATGGTTATGTTATTGGAAGTAGCATCAAGTCAGTTCCTATTGCTGGAAAGGATGTTACTCTTTTTGTCCAGCAGCTAATGCGGGAAAGAGGAGAGAATATACCTCCAGAAGACTCTTTTGAAGTGGCTCGGAAAGTGAAAGAAATGCATTGCTACACCTGCTCTGACATAGTGAAGGAATTTAATAAGCATGACAAAGAACCAGCCAAGTATATCAAGCAATGGAGAGGCGTAAAACCAAAGACCGGGGCTCCATATTCCTGTGATATTGGCTATGAACGCTTTCTTGGCCCTGAGGTTTGTTCTTAG 882 0.4422 MDPAASRPAVVIDNGSGYTKMGFAGNVEPCFIVPTVVAINESFLNQSRSSSKGNWIAQHNAGVMADLDFFIGDDALSKARSSSTYNLTYPIKHGQVENWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDIGDGATHVVPVADGYVIGSSIKSVPIAGKDVTLFVQQLMRERGENIPPEDSFEVARKVKEMHCYTCSDIVKEFNKHDKEPAKYIKQWRGVKPKTGAPYSCDIGYERFLGPEVCS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1363 293 PANTHER ACTIN 7 291 IPR004000 -
Psa7g1363 293 CDD NBD_sugar-kinase_HSP70_actin 10 206 - -
Psa7g1363 293 Gene3D Actin; Chain A, domain 4 207 292 - -
Psa7g1363 293 Pfam Actin 7 261 IPR004000 -
Psa7g1363 293 Gene3D - 4 188 - -
Psa7g1363 293 SMART actin_3 7 293 IPR004000 -
Psa7g1363 293 PANTHER ACTIN-RELATED PROTEIN 3-LIKE 7 291 - -
Psa7g1363 293 SUPERFAMILY Actin-like ATPase domain 7 177 IPR043129 -
Psa7g1363 293 SUPERFAMILY Actin-like ATPase domain 173 291 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1363 Psa-Chr7 99182244 99184322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1363 9 292 Miscellaneous Gene Families AT2G42100 36.268 5.04e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1363 K18584 - mnt:21410251 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1363 7 99182244 99184322 Psa7g1363 7 99182244 99184322 ECH