Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0916 ATGGGAGAACCAAAGCGAATCCCTCTGGCAATTTTTCCACTGCTCTTCTTCGTGATTTCTACCTCATCGTTACACCTTCTCACTGCTTCCGATGCCGATGACGCGATCTTCTACGAATCATTTGACGAGGCTTTTGATGGTCGTTGGATCCTTTCCGATAAGGATGAATACAACGGTGTTTGGGAGCATGCAAAGAGCGAGGGTCATGAAGATTACGGGCTTCTTGTCAGCCAGAAAGCAAGAAAATATGCGATAGTAAAAGAACTTGATGAGCCTGTGAGTCTTAAGGATAAATCAGTTGTTCTTCAGTTTGAGACTCGCCTTCAGAATGGCCTCGAGTGTGGTGGTGCATACATAAAATATCTTCGACCACAGGAGGCCGGTTGGAAGCCCAAGGAATTTGGCAATGATTCTCCATATTCAATTATGTTTGGTCCTGACAAGTGTGGAGCCACAAACAAGGTGCATTTCATTTTCAAGCATAAGAATCCCAAGAGTGGGGAGTATGTTGAACATCATCTCAAGTTTCCTCCATCCGTTCCTTCTGACAAATTATCTCATGTGTACACCGCTATTTTAAAACCAGACAACAAGTTACAAATTTTGATTGATGGAGAAGAGAAGAAAAAAGCAAATTTCTTATCTTCTGAGGATTTCGAGCCTTCCCTTATCCCTCCCAAGACAATCCCTGATCCTGAAGATAAGAAACCTGAAGACTGGGACGAGAGAGAGAAAATTCCAGACCCAAATGCAGTAAAGCCAGATGACTGGGATGAAGATGCACCCTTGGAAATTGTTGATGACGAAGCTGAAAAACCTGAAGGATGGTTGGATGATGAGCCTGAGGAGGTAGATGACCCAGAAGCTACAAGACCAGAAGATTGGGACGATGAGGAGGATGGTGAATGGGAAGCCCCAAAGGTTACCAACCCAAAGTGTGAAGCAGCCCCTGGTTGTGGTGAGTGGAAGAGGCCAATGAAGAAGAATCCAGCATATAAGGGAAAATGGCATGCTCCCCTTATTGAAAATCCAGCTTATAAGGGTATATGGAAGCCTCAGGATATTCCAAACCCGGATTACTTTGAGCTTAAAAAACCTGATTTTGAGCCTATTGCTGCTATTGGTATTGAGATTTGGACAATGCAAGACGGTATATTGTTTGACAATATTTTGATAGCTAAAGATGATAAGATTGCAGCATCATACCGAGAGACTACATGGAAACCCAAGTTTTTTGTTGAGAAAGAGAAACAGAAGGAAGAAGATTCGGACACTGAATCAAGTGGTCTTGCAAGCATCCAAAAGAAGGTATTTGACCTATTATACAAGATTGCAGACATTCCCTTCCTGAGTGCCTACAAGCTTAAAATACATAATATAATTGAAAAGGGTGAATCACAGCCGAATCTCACAGTTGGAATTCTTGTAGCTGTTGTGGTTATTGTCTTGTCAATTTTCCTCAGGGCCATATTTGGTGGGAAGAAAACGCCAGCAAGAGTGGTGAAGACAGACACACCAGCCACGGAAACTTCCACTAGCCAAGGTGATGGAGAGAATGAAGAAGACAAAGAGGAGGAAACATCAAAGGCTCCACGCCGAAGGGTAAAGCGAGACAATTAA 1620 0.4309 MGEPKRIPLAIFPLLFFVISTSSLHLLTASDADDAIFYESFDEAFDGRWILSDKDEYNGVWEHAKSEGHEDYGLLVSQKARKYAIVKELDEPVSLKDKSVVLQFETRLQNGLECGGAYIKYLRPQEAGWKPKEFGNDSPYSIMFGPDKCGATNKVHFIFKHKNPKSGEYVEHHLKFPPSVPSDKLSHVYTAILKPDNKLQILIDGEEKKKANFLSSEDFEPSLIPPKTIPDPEDKKPEDWDEREKIPDPNAVKPDDWDEDAPLEIVDDEAEKPEGWLDDEPEEVDDPEATRPEDWDDEEDGEWEAPKVTNPKCEAAPGCGEWKRPMKKNPAYKGKWHAPLIENPAYKGIWKPQDIPNPDYFELKKPDFEPIAAIGIEIWTMQDGILFDNILIAKDDKIAASYRETTWKPKFFVEKEKQKEEDSDTESSGLASIQKKVFDLLYKIADIPFLSAYKLKIHNIIEKGESQPNLTVGILVAVVVIVLSIFLRAIFGGKKTPARVVKTDTPATETSTSQGDGENEEDKEEETSKAPRRRVKRDN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0916 539 ProSitePatterns Calreticulin family signature 2. 142 150 IPR018124 GO:0005509
Psa7g0916 539 MobiDBLite consensus disorder prediction 213 308 - -
Psa7g0916 539 MobiDBLite consensus disorder prediction 524 539 - -
Psa7g0916 539 MobiDBLite consensus disorder prediction 229 259 - -
Psa7g0916 539 PRINTS Calreticulin signature 109 127 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PRINTS Calreticulin signature 138 154 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PRINTS Calreticulin signature 236 249 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PRINTS Calreticulin signature 284 306 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PRINTS Calreticulin signature 341 360 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PRINTS Calreticulin signature 373 393 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 Gene3D Calreticulin/calnexin, P domain 222 366 IPR009033 GO:0005509|GO:0005515
Psa7g0916 539 Gene3D - 37 402 - -
Psa7g0916 539 SUPERFAMILY P-domain of calnexin/calreticulin 223 362 IPR009033 GO:0005509|GO:0005515
Psa7g0916 539 PANTHER CALRETICULIN AND CALNEXIN 12 196 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PANTHER CALRETICULIN AND CALNEXIN 196 539 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 PANTHER - 12 196 - -
Psa7g0916 539 PANTHER - 196 539 - -
Psa7g0916 539 MobiDBLite consensus disorder prediction 499 539 - -
Psa7g0916 539 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 260 IPR013320 -
Psa7g0916 539 Pfam Calreticulin family 37 392 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Psa7g0916 539 ProSitePatterns Calreticulin family signature 1. 107 122 IPR018124 GO:0005509
Psa7g0916 539 MobiDBLite consensus disorder prediction 260 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0916 Psa-Chr7 69196947 69201506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0916 11 539 Miscellaneous Gene Families AT5G61790 73.774 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0916 K08054 - gmx:100785901 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0916 7 69196947 69201506 Psa7g0916 7 69196947 69201506 ECH