Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0904 ATGGGAAATTGCTGCTCCGATATCGCCGGCGGACGCACGGCCGTCGGCGGAACAGCCGGAAGTTTGCTCAATTCGGCGAACGCTCCCAACGACGCCGTCGATAACTTCTTCAAGTCTCGCGGCTACCACGGTCTCTTCTCACAGATCGAGTTGTCGTTTTCTGCTTCTGGCTTGCGTGATCGAGATGTGCTCTCCAAGAGCGATCCAATACTGGTTCTTTATGCAAAAGGAAAAAATGGAGCACTTGAGGAACTTGGCCGGACAGAAGTAGTTTTGAATTCATTGAATCCGACATGGATTACTAAACAAACTCTCATTTATCATTTTGAGGTTGTTCAGGTTTTAGTGTTTCACGTTTATGATGTTGACACTCAGTTTCACAATGCAGATGTGAAGATACTTAAGCTAGAAGAACAACAATTTCTAGGTGAGGCAACATGTGCATTATCTGAGATAATTACAAAGTCTGATGGATCATTGACATTAGATTTACTCAGACAAGATTCTATCAGATCTGGCGACTCCCAAAAATGTGGGAAGCTCAAAGTTCATGCTGAGGAATGTGTTGGCTCAAAGACTACAGTAGAGATGATACTCAGGTGTTCAGATTTGGAATATAGGGACCTCTTCTCAAAGAGTGATCCCTTTTTAATAGTATCAAAAGTTGTGGAAAGTGGTGCCCATATTCCAATTTGCAAAACTGAAGCTATAAAGAATGATCACCACCCAACATGGAAGCCGTTGTTCTTGAATATTCAACAAGTGGGAAGCAAGGAAAGTCCATTGATAGTAGAGTGCTACAACTTTAATAGCAGTGGCAAACATGATTTGTTGGGAAAAGTGCAGACATCTTTGGTAGAGTTGGAGAAGCTCTATTCTGGTGGCCAAGGAGAAAATTTATTTTTGTCTGGTGGTCATGATTCTCAGGCCAAGGTTTTGAAGAGTCGGCTATTTGTGGATAAATTTTCTGAAAGCATCCAATATACTTTCCTGGATTACCTGGCTGGGGGATTTGAATTGAACTTCATGCTGGCCGTTGATTATACAGCGTCAAATGGCAATTCACGCCTTCCAGATTCTTTGCATTATATTGATCCTTCAGGACGTCCAAATTCATACCAGAGAGCAATCATTGAGGTTGGAGAGGTGTTACAGTTTTATGATGCAGACAAGCGATTTCCGACGTGGGGATTTGGAGCACGGCCAATTGATGGTCCGGTCTCCCATTGTTTCAACTTGAATGGAAGCAATAGTTACTGTGAGGTGGATGGTATTCAAGGAATTATGATGGCATACACAAGTGCTCTGCTTAACGTTTCTCTTGCAGGACCAACACTTTTTGGACCTGTCATAAATAATGCCGCACTTATTGCCAGCCAATCTGTAGCAAATGGTGGAAGAAAGTACTTTATCTTGTTGATAATCACAGTAAGAATTAGAATATATGCAGTTTTCTATATCATTGAAGTTTAG 1473 0.4189 MGNCCSDIAGGRTAVGGTAGSLLNSANAPNDAVDNFFKSRGYHGLFSQIELSFSASGLRDRDVLSKSDPILVLYAKGKNGALEELGRTEVVLNSLNPTWITKQTLIYHFEVVQVLVFHVYDVDTQFHNADVKILKLEEQQFLGEATCALSEIITKSDGSLTLDLLRQDSIRSGDSQKCGKLKVHAEECVGSKTTVEMILRCSDLEYRDLFSKSDPFLIVSKVVESGAHIPICKTEAIKNDHHPTWKPLFLNIQQVGSKESPLIVECYNFNSSGKHDLLGKVQTSLVELEKLYSGGQGENLFLSGGHDSQAKVLKSRLFVDKFSESIQYTFLDYLAGGFELNFMLAVDYTASNGNSRLPDSLHYIDPSGRPNSYQRAIIEVGEVLQFYDADKRFPTWGFGARPIDGPVSHCFNLNGSNSYCEVDGIQGIMMAYTSALLNVSLAGPTLFGPVINNAALIASQSVANGGRKYFILLIITVRIRIYAVFYIIEV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0904 490 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 164 IPR035892 -
Psa7g0904 490 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 197 290 IPR035892 -
Psa7g0904 490 Gene3D C2 domain 198 312 IPR035892 -
Psa7g0904 490 ProSiteProfiles C2 domain profile. 28 162 IPR000008 -
Psa7g0904 490 CDD C2A_Copine 47 164 - -
Psa7g0904 490 PANTHER COPINE 1 477 IPR045052 GO:0005544
Psa7g0904 490 ProSiteProfiles C2 domain profile. 177 301 IPR000008 -
Psa7g0904 490 SMART C2_3c 48 161 IPR000008 -
Psa7g0904 490 SMART C2_3c 198 300 IPR000008 -
Psa7g0904 490 Pfam Copine 360 476 IPR010734 -
Psa7g0904 490 Gene3D C2 domain 52 197 IPR035892 -
Psa7g0904 490 CDD C2B_Copine 195 290 IPR037768 -
Psa7g0904 490 Pfam C2 domain 198 292 IPR000008 -
Psa7g0904 490 Pfam C2 domain 54 158 IPR000008 -
Psa7g0904 490 PANTHER CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING COPINE FAMILY PROTEIN-RELATED 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0904 Psa-Chr7 68638502 68646298 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0904 - - gmx:100807801 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0904 7 68638502 68646298 Psa7g0904 7 68638502 68646298 ECH