Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g0855 | ATGGATCTTCCCGTCAAGGAAGAAGCATTGGAAATTCCAATTCCAGCTGAACCGGACCGGAAGCCTAGAAGAAAACCCGGTTCGCATGTTCCACCACCTGACTCGGTTATTGACCTCAGTAGCAGTAGCAGCGATTCCGACTCCGATTCCGATTCCGTCGGGGATTTGGAAACGGTTGTAGCGAGTGTGATTCAATCGGCGGAAAGTCCGTCCAAGAAAAGAAAGGTTAATGATAAGGTAGCGATTTTGCCGGCGGGGTTTCTTAGTCCGTTGCCGCCTGCGCCGTCGCAGAATGCTGTTCTGTCTTTGCCGGCGCCGGAGTGGGCTTCTACGTCCAACAGGTTAAATCGGAATATTAGTTATACGCTTAAGGGATGTAAGCAGTTTTGGAAAGCCGGAGATTATGAAGGTTCTCCTGGTCGTGCCTTTGAATCTTCTTCAGTTGGTATGGATCATGTCAGGGTTCATCCCAAGTTTCTACATTCTAATGCCACAAGTCATAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAACGCATTGGATGAGGTTTGTAATGGTGCCACATATGTAAATGTAGATATGATTGAGAGTAAGAAAGATGGCTCCAAGATGTTGCTAGTTGAAGATAACGGTGGTGGGATGGATCCTGATAAAATACGTCAATGCATGTCGCTGGGATATTCCATGAAAAGCAAGATGGCAAATACAATTGGACAATATGGAAATGGCTTTAAAACAAGTACCATGAGGCTTGGGGCTGATGTAATTGTGTTCTCCCGTTGTATAGGAAAAGATGGGAAGAGGTCTACACAGAGCATAGGCTTGCTGTCTTATACATTTTTGAGGAATACAGGGAAGGAAGACATCGTAGTGCCCATGCTGGACTACGAAAGGGATGGACAGGGATGGAAAAGGATGTTACGAACTTCTCTGGATGATTGGAAGAATAATGTTGAGACAGTAGTTCAGTGGTCACCATTTTCTGATGAGGCTGACCTTCTTCGTCAGTTCAACCTGTTGAAAGATCAAGGTACACGGGTAATTATATACAATCTCTGGGAGGATGACCAAGGTCAGCTGGAACTCGATTTTGAAGACGATCCACATGATATTCAAATAAAAGGTGTAAATCGAGATGAGAAAAACATCAAGATGGCTAAAGATTTTCCGAACTCTACACACTTTTTAACTTATCGACATTCACTGAGGAGTTATGCTTCAATTTTATATCTGAGGTTTCCTCAAGGCTTTCGAATTATTCTTCGTGGGAAAGATGTTTTGCATCACAATATAGTCAATGATATGATGTATTCTCAGGAGGTCACATACAGGCCTCAATCAGGAGTTGCTGATGGGGTTCTAAAGGATTCAAATATGGTTGCTATTGTTACGATCGGGTTTGTCAAGGATGCAAAACACCATATTGATGTTTCAGGGTTTAATGTCTATCACAAGAATCGGCTCATCAAGCCATTCTGGAGGATCTGGAATCCAGCAGGCAGTGGTGGCCGTGGGGTCATAGGTGTATTGGAAGCCAACTTTGTTGAACCTGCTCATGACAAGCAAGGCTTTGAACGTACATTAGTCTTGTCAAGACTGGAGCAACGGCTGATACAAATGCAGAAAACTTATTGGGGAAGTAACAGCCATAAAATTGGATATGCTTCAAATCGAGTTAGAAAAGAAAACAGTAGTTTTCCTGCTAATGATACATCTCCCGATCCTGTTCCAGAATCATCTCAATTGAAAAGGAAATATTCGGCCCCAAATGGCAAGGCATCACCATTGGCATCAGATGAACTGCATTCACACTCGAAACAGAAACATATGCAAACAGAATCGAAAAGATATAGTGAACACAGAAATGGTCACTCGGCAGTTTCCCCTATAAGTATGAGTCAAAGTTCATCAGAACAATCATCATATGCTGATGATACCAGTGATCGAAATGATAATGTCTCATCAAAGAACCAAGCAAAGACTGATAGTCGAAAGATTTCTAGTGTTGGAAAATCTTCGAGAAAGGAGAATGTAAATTTTCAGGATTCTACACCAAGGGGAAACGCCTGGCAGTCTACGCAAGGATCTAACCCAAAGGGAAAAGATGTTAATGTTCCTGAGCCACCAATATCTGATTTATCTTCTCTAGAACAGTTGACAAAAGAGAATCGTGAGTTGAAGGAGAGATTAGAGAAGAAAGAGGAAGAATCATTAGGGGAATTATCACAAGCTTTACAGGAGGAGAGAGATATGCGCAAATCTCTCGAAGCTCAGCTCCGTGATGCCGAACAAAAGATTGATGATATGAACAAGGAACAAGAAACTCTAATTGATGTGTTCGCCGAAGAGAGAGATAGGCGGAATGCAGAAGAAAAAAATTTGAGAAAGAAGCTTCAGGAAGCATCAAATACCATTCAAGAGCTGCTGGAGAAAGTTCGATTACTTGAAAGGAAGGCTTCAAGTGGCAAAGTGTAG | 2481 | 0.4252 | MDLPVKEEALEIPIPAEPDRKPRRKPGSHVPPPDSVIDLSSSSSDSDSDSDSVGDLETVVASVIQSAESPSKKRKVNDKVAILPAGFLSPLPPAPSQNAVLSLPAPEWASTSNRLNRNISYTLKGCKQFWKAGDYEGSPGRAFESSSVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVCNGATYVNVDMIESKKDGSKMLLVEDNGGGMDPDKIRQCMSLGYSMKSKMANTIGQYGNGFKTSTMRLGADVIVFSRCIGKDGKRSTQSIGLLSYTFLRNTGKEDIVVPMLDYERDGQGWKRMLRTSLDDWKNNVETVVQWSPFSDEADLLRQFNLLKDQGTRVIIYNLWEDDQGQLELDFEDDPHDIQIKGVNRDEKNIKMAKDFPNSTHFLTYRHSLRSYASILYLRFPQGFRIILRGKDVLHHNIVNDMMYSQEVTYRPQSGVADGVLKDSNMVAIVTIGFVKDAKHHIDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLEQRLIQMQKTYWGSNSHKIGYASNRVRKENSSFPANDTSPDPVPESSQLKRKYSAPNGKASPLASDELHSHSKQKHMQTESKRYSEHRNGHSAVSPISMSQSSSEQSSYADDTSDRNDNVSSKNQAKTDSRKISSVGKSSRKENVNFQDSTPRGNAWQSTQGSNPKGKDVNVPEPPISDLSSLEQLTKENRELKERLEKKEEESLGELSQALQEERDMRKSLEAQLRDAEQKIDDMNKEQETLIDVFAEERDRRNAEEKNLRKKLQEASNTIQELLEKVRLLERKASSGKV* | 827 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 563 | 589 | - | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 35 | 55 | - | - | |
| Psa7g0855 | 826 | Coils | Coil | 715 | 820 | - | - | |
| Psa7g0855 | 826 | Gene3D | - | 157 | 357 | IPR036890 | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 626 | 702 | - | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
| Psa7g0855 | 826 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 172 | 372 | IPR036890 | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 720 | 772 | - | - | |
| Psa7g0855 | 826 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 172 | 275 | - | - | |
| Psa7g0855 | 826 | Pfam | Morc6 ribosomal protein S5 domain 2-like | 402 | 547 | IPR041006 | - | |
| Psa7g0855 | 826 | PANTHER | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. | 1 | 813 | IPR045261 | GO:0016887 | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 563 | 772 | - | - | |
| Psa7g0855 | 826 | MobiDBLite | consensus disorder prediction | 601 | 624 | - | - | |
| Psa7g0855 | 826 | PANTHER | PROTEIN MICRORCHIDIA 7 | 1 | 813 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g0855 | Psa-Chr7 | 62959993 | 62970467 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g0855 | - | - | gmx:100816702 | 1070.46 |
Event-related genes