Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0849 ATGAGTGCAATTTGCAACATACTAAATGTAGTATTGCCCCCATTGTCACTGATTATACTCCCTATCATTATGCTACCTTATATTTTCTTCAAATTGCTTATTCATGGAAAAAACTTGGTGTACAAAGAAAACATGGCAAGAAAAGTAGTACTAATCACAGGGGCAGCCTCAGGAATTGGGGAGCAATTAGCTTATGAATATGCTAGACGAGGAGCAAGGTTGTCCCTTGTTGACATTAGAAAGGAGAATCTTGTAGCAGTGGCTGAAATGGCAAGATCTCTTGGTTCTCCTGATGTTATCTTCATCGGCGCAGATGTTTCCGACGCTGAAGAAAGTAAACGATTTGTCGATGAAACAATTGACCACTTTAAACAACTGGATCATCTAGTCAATAATGCTGGAATTACAATTCCAGGGTTGATAGAGGATTGTTCTGATATTACTAAATACAGTCCAATTATAGATGTAAATTTCTGGGGAGCAGTTCATGGGACTTTACATGCAATTCCACATCTAAAAAAAAGTAAAGGAAGGATCATAGTGATTGCTTCAACTTGTGGATGGTTCCCTCTTCCAAGAACCAGTTTCTATAATGCTAGTAAGGCAGCATTAATAAGTTTCTTTGAGACATTAAGAGTTGAACTTGGTTGGTCTATTGGCATAACAATTGTCACACCAGGATTTATCAAAACAGAACTAGCATTGAAGGCTTATGAAAATACGACTTGTCTGAGAATAATTCCAATGGGGTCAGCATTTGATTGTGCCAAAGACATAGTGAAAAGTGCATGTAGAGGAGATATGTATGTGACAAATCCTTCATGGGTCAAAGTGTTGTTTCCTTTTAAGGTGTTTTATCCTGAGCTTGTGGATTGGGTCCAACAACACATCTTTGGGCCTTTGCCAAACCCTGCTTGTAAGAAAGGAAATAGTAAGACAGATTAA 945 0.381 MSAICNILNVVLPPLSLIILPIIMLPYIFFKLLIHGKNLVYKENMARKVVLITGAASGIGEQLAYEYARRGARLSLVDIRKENLVAVAEMARSLGSPDVIFIGADVSDAEESKRFVDETIDHFKQLDHLVNNAGITIPGLIEDCSDITKYSPIIDVNFWGAVHGTLHAIPHLKKSKGRIIVIASTCGWFPLPRTSFYNASKAALISFFETLRVELGWSIGITIVTPGFIKTELALKAYENTTCLRIIPMGSAFDCAKDIVKSACRGDMYVTNPSWVKVLFPFKVFYPELVDWVQQHIFGPLPNPACKKGNSKTD* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0849 314 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 48 232 - -
Psa7g0849 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Psa7g0849 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Psa7g0849 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Psa7g0849 314 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
Psa7g0849 314 Gene3D - 34 299 - -
Psa7g0849 314 PANTHER RETINOL DEHYDROGENASE-RELATED 1 298 - -
Psa7g0849 314 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Psa7g0849 314 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Psa7g0849 314 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Psa7g0849 314 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Psa7g0849 314 PRINTS Glucose/ribitol dehydrogenase family signature 217 234 IPR002347 -
Psa7g0849 314 Pfam short chain dehydrogenase 48 239 IPR002347 -
Psa7g0849 314 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 1 298 - -
Psa7g0849 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 296 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0849 Psa-Chr7 62397775 62399618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0849 49 250 Acyl Lipid Metabolism Gene Families AT1G24360 31.731 1.28e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0849 K22418 - gmx:100808990 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0849 7 62397775 62399618 Psa7g0849 7 62397775 62399618 ECH