Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0830 ATGGTGGCTTCGTCGCAAAAGATACTCGTAACCGGCGGTGCCGGTTTCATCGGCACTCACACGGTGGTTCAGCTTCTAAATAACGGCTTCAACGTTTCCATCATTGATAATTTCGATAATTCTGTTATGGAAGCAGTGGAGCGCGTCCGTGAAGTTGTTGGTTCTAACCTCTCTCAGAATCTCGAATTCACTCTGGGAGATCTCAGGAATAAAGATGATTTGGAGAAACTCTTCTCAAAATCTAAATTTGATGCTGTGATTCACTTTGCTGGACTAAAAGCAGTTGGTGAGAGTGTTGAAAATCCTCGTCGTTATTTCGATAATAATCTTGTTGGAACTATCAATCTCTATGAAGTTATGGCTAAGCATAATTGTAAAAAGATGGTTTTCTCGTCATCTGCAACTGTTTATGGCCAACCTGAAAAGATACCCTGCGTGGAGGATTTCAAGTTACAAGCCATGAACCCTTATGGACGGACCAAGCTCTTCCTTGAAGAAATTGCACGAGATATTCAGAAAGCTGAGCCAGAATGGAGAATCGTTTTACTGCGGTACTTCAATCCAGTCGGGGCACATGAAAGTGGTAAACTTGGTGAAGATCCCAGAGGCATCCCAAATAATCTCATGCCTTATATACAGCAAGTAGCCGTTGGAAGATTACCTGAGCTCAATGTATATGGTCATGATTATCCTACAAGGGATGGCTCTGCGATACGGGACTATATCCATGTGATGGACTTAGCAGATGGTCACATTGCTGCCCTGAGAAAGCTTTTCACATCAGAAAACATTGGTTGTACTGCTTATAATTTGGGAACTGGTCGTGGTTCATCTGTGCTTGAAATGGTTGCTGCATTTGAGAAAGCTTCTGGCAAGAAAATTGCATTGAAATTGTGTCCAAGAAGGCCAGGAGATGCTACAGAGGTTTATGCATCCACAGCGAAAGCTGAGAAAGAACTTGGTTGGAAGGCCAAATATGGTGTAGAGGAAATGTGCAGGGACCAGTGGAATTGGGCAAAGAACAACCCGTGGGGTTACTCAGGAAAGCCTTGA 1053 0.434 MVASSQKILVTGGAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGKP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0830 350 Pfam GDP-mannose 4,6 dehydratase 9 334 IPR016040 -
Psa7g0830 350 CDD UDP_G4E_1_SDR_e 7 340 IPR005886 GO:0003978|GO:0006012
Psa7g0830 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 346 IPR036291 -
Psa7g0830 350 TIGRFAM galE: UDP-glucose 4-epimerase GalE 7 343 IPR005886 GO:0003978|GO:0006012
Psa7g0830 350 PANTHER BIFUNCTIONAL UDP-GLUCOSE 4-EPIMERASE AND UDP-XYLOSE 4-EPIMERASE 1 3 349 - -
Psa7g0830 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 3 349 - -
Psa7g0830 350 Gene3D - 8 279 - -
Psa7g0830 350 Gene3D - 197 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0830 Psa-Chr7 59819646 59824779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0830 8 338 Miscellaneous Gene Families AT4G00110 28.035 8.94e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0830 K01784 - gmx:100781806 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0830 7 59819646 59824779 Psa7g0830 7 59819646 59824779 ECH