Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0819 ATGACTCCTCTCATAAAAACCTCCTTTCTATTCTCTCTCATCACTCTCTCCACCTTCACATACACACAAGCTGCAACAATCGAGGTCAAAAACAACTGCCCCTACAAAGTATGGGCCGCGGCCGCCCCAGGCGGCGGTAAGCCCCTAAACACCGGCGAATCATGGACCATCACTGCAGCTGCAGGCACCCAAAAGGCCCGTGTTTGGGCCCGAACCGGATGCAACTTCGACAACTCAGGCAACGGCCATTGCCAAACCGGTGACTGCGGCGGTGTCCTAAATTGCCAAGCATACGGTACACCTCCAAACACTCTAGCAGAGTACGCTTTAAACCAATACATGAATTTGGACTTTTTCGACATTTCCCTTGTCGATGGATTCAACGTTCCAATGGATTTTAGTCCAACCTCAAACGGGTGTCGTGGCATAAGGTGTACCGCTGATATCAACGGACAGTGTCCTAGTCAATTACGAACTCAAGGCGGTTGTAACAACCCATGTACTGTTTTTAAAACCGATAATTACTGTTGTAATTCAGGTAGCTGTCAGGCCACTGATTATTCAAGATATTTTAAGACTAGGTGCCCTGATGCTTATAGTTACCCCAAGGATGATGCGACAAGTACATTCACTTGCCCCGGTGGAACCAATTACAGGGTTGTCTTTTGTCCGTAA 675 0.48 MTPLIKTSFLFSLITLSTFTYTQAATIEVKNNCPYKVWAAAAPGGGKPLNTGESWTITAAAGTQKARVWARTGCNFDNSGNGHCQTGDCGGVLNCQAYGTPPNTLAEYALNQYMNLDFFDISLVDGFNVPMDFSPTSNGCRGIRCTADINGQCPSQLRTQGGCNNPCTVFKTDNYCCNSGSCQATDYSRYFKTRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0819 224 SMART tha2 27 224 IPR001938 -
Psa7g0819 224 Gene3D Thaumatin 25 224 IPR037176 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Psa7g0819 224 PRINTS Pathogenesis-related protein signature 214 223 IPR001938 -
Psa7g0819 224 CDD TLP-P 27 224 - -
Psa7g0819 224 Pfam Thaumatin family 31 224 IPR001938 -
Psa7g0819 224 SUPERFAMILY Osmotin, thaumatin-like protein 24 224 IPR037176 -
Psa7g0819 224 PANTHER OS03G0233200 PROTEIN 8 224 IPR001938 -
Psa7g0819 224 ProSiteProfiles Thaumatin family profile. 24 224 IPR001938 -
Psa7g0819 224 PANTHER THAUMATIN-RELATED 8 224 - -
Psa7g0819 224 PIRSF PR5 2 224 IPR001938 -
Psa7g0819 224 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0819 Psa-Chr7 59473899 59475405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0819 1 224 Receptor kinase-like Gene Family AT5G38280 33.466 3.42e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0819 - - gmx:100301882 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4149 2 421307001 421308765 Psa7g0819 7 59473899 59475405 PCT