Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0815 ATGGAGTCTCTTCCTCTCACCACTAAAACCTCATTCCTCACCGCCACTACTCACTTTCCATGGCTTCCATCCTCCAACAGAACAACAACAACAAGAACTGTTTATCTAAATCAAAGAAAAATCAACAAGGTTTTTGCCTCATCATCACACTCACACGATGAACAGAAAAAACCTAAACTCGATAATGAAGACCTCATGGAACTCAAGTTCGGTCGTTTACTTGGCGAGGATCCTAAACTCACTCTTGCCAAGATTATGGGAAGAAAAACCAACCCTGATGCTTCTTATCTTGATATTGAGAAATCATTTTATAAAAGAAAAAAGGGGAAAGTTGTGGAAATTGAGGAACTTCCATTTGAAGTTGAAAGACCTTGGGCAAAGACTTCACCTCCCAAACCACAACTCGAACCCGTTGATAAGAATGTTGCAATGGAGATTAAGAAACCTAGCTTGCCGCCGAGTAAGTTGGGGAATGTTAGGAGAAGTAGTGTTCCTAAGGCTATTTTGAGAAAACCGTCCTTGTTTAAAAAGGAGGAGGATGGAGAGAAGGATGAAGAGGAAGATGTGTCTTCGAGGTTGGTGTTAAAACCGAATTTGAGTCTGAGTGGACAAGTGAAGGAGAAGTTTAGTGACATGACATTGTTGAGGAAGCCGGGGTTGTCCATTGGTGGGAATAGGGATGGTGGGTTGAAGATGCGGAAAGAAGAGCCGGGTTATGAAGTTGCTAACTTGACGTTGTTGGAACAACCGCATAGATCGGGTTGTAATAAAGAACTAGAGAAATTTGCGGAGCCGGGTGATGGAGTTGGTAAGTTGACGTTGTTGGAACAGCCGCACAGACCAAGTAGTAATAAAGAACTAGAGAAGTTTGCAGAGACAGGTGATGAAGTCGGTACATTGAGCTTGTTGGAACAACCACATAGACCAAGCAGCAAAAAAGAGGAAGAGAAGTTTGACCAGCCAAGTGATGAAGTCGCTAATTTGAGCCTGTTGGAACAGCCGCACAGACCAAGCGGCAAAAAGGAACAAAAGAAGTTTGAAGATCCAAGTGATGAAGTCGCTAAATTGAGTTTGATGGAACAGCCACACAGACCAAGCGGCAAAAAAGAACAAGAGAAGATTGAAGAGCAAAGTGATAAAATCACTAAATTGAGCTTGTTGGAACAGCCACACAAACCAAGCGGCAAAAAAGAACAAGAGAAGTTTGAAGGTCCAAGTGATGAAGTCGCTAAATTGAGTTTGATGGAACAGCCGCACAGACCAAGCGGCAAAAAAGAACAAGAGAAGATTGAAGAGCTAAGTGATAAAATCACTAAATTTAGCTTGTTGGAACAGCCACACAAACCAAGCGGCAAAATAGAACATGAGAAATTTGAAGATCCAAGTGATGAAGACGCTACATTGAACTTGTTGGAACAGCCACAAAGACCAAGCGGCAAAAAAGAACAAGAGCAGTCTGAAGAGCTAAGTAATATAGTCAAGAAGGTGATCTTGTTGGAACAGACACACAGACCGAGTGACAAAGACGAAAAGCAGTTTGGAGATGCGAGAGTCGTAGTCCCAAATGATGGATCGGAGCAAGATGAGCAGAGACAACCAGAGGTCCATCAGGAGCCGATCGATTTAAATCAACCGTCTGATTTAAATTCCGTTGGTTCTAAGACGGAGTTGTCCGTCGAAGCTGCAATACAAGGAAAGCCAAAAAGATTAGATCAATATGTGAAACAAACCTCCAAACCTGCTGAAGAAAAAACTGCTTCTCTTGATCCTGGAAGTCGCGGAAACAGCGAAGAATCAGGCAATTTTTTTGATGCGTCAGATATTCAGGAAGGCGATGATGCTGATTGGACCAGGGCAGAAGATTTTATTAAGAATGGAGATAGAGACGATGTGGAACTAATAAGCTGCAGCGCCAAGGGTTTCGTTGTTTCTTTTGGTACCTTGGTTGGATTTCTGCCATACCGTAATCTTTTGTCCAAGTGGAAGTTCTTAGCTTTTGAGTCATGGTTAAGGCAGAAGGGCTTGGATCCATCAATGTACAAGCAAAACTTGGTCACTGTGACAAATAATGATGCTGAAAATAATAATTTGTCAGCTGATCCTCCTTTGCATACGGAGAATGATAGTAAATTTGAAGATAAAGTTTCTCCAGATATGAAATTGGAAGATCTGTTAAGGATTTATGACCAAGAGAAAGTCAATTTCTTATCATCATTTATTGGACAGAAAACCAAAGCATATGTGTTATTGGCAGACAGAAAATTGAAAAAACTCATATTTTCAGTCAAACCAAAAGAGAATGAAGAACTAACTGAGAAAAAGAGAAAGCTTATGGCTAGACTTCAAGTTGGTGATATAGTGAAATGCCGCGTCCAGAAGATAGCTTACTTTGGAGTTTTTGTTGAGGTTGAGGGAGTTTCTGCACTAATTCATCAGTCAGAAATATCTTGGGATGCCACACTGGACCCATCTAATTATTTTAAGATTGATCAGGTTATAGAGGCAAAAGTTCACCAAATAAACTCTGCTCTTGGGCGCATATTTTTATCATTAAAGGAGGTCACGCCTGATCCATTGATGGAATCCTTAGAGTCTGTATTTGGGGATCATGAATCCTTTGGTGGGAGATTGGAAGCAGCTCAAACTGATGCAGAGTGGTCTGAAGTTGAATCTCTTATAAAAGAATTGCAAAAAATTGAGGGAGTCCAGTCTGTTTCAAAAGGCCGTTTTTTCAGGAGCCCTGGTTTAGCTCCCACATTTCAGGTTTATATGGCATCCATCTTTGCGGATCAGTACAAGTTGCTTGCCCGTTCAGGAAACAGAATACAAGAGGTGATGGTTCAAACTGTTTTAGATAAAGAAGAGATGAAGTCAGCTATTATGACATGTGCAAGTAGGGTAGAATAG 2907 0.4118 MESLPLTTKTSFLTATTHFPWLPSSNRTTTTRTVYLNQRKINKVFASSSHSHDEQKKPKLDNEDLMELKFGRLLGEDPKLTLAKIMGRKTNPDASYLDIEKSFYKRKKGKVVEIEELPFEVERPWAKTSPPKPQLEPVDKNVAMEIKKPSLPPSKLGNVRRSSVPKAILRKPSLFKKEEDGEKDEEEDVSSRLVLKPNLSLSGQVKEKFSDMTLLRKPGLSIGGNRDGGLKMRKEEPGYEVANLTLLEQPHRSGCNKELEKFAEPGDGVGKLTLLEQPHRPSSNKELEKFAETGDEVGTLSLLEQPHRPSSKKEEEKFDQPSDEVANLSLLEQPHRPSGKKEQKKFEDPSDEVAKLSLMEQPHRPSGKKEQEKIEEQSDKITKLSLLEQPHKPSGKKEQEKFEGPSDEVAKLSLMEQPHRPSGKKEQEKIEELSDKITKFSLLEQPHKPSGKIEHEKFEDPSDEDATLNLLEQPQRPSGKKEQEQSEELSNIVKKVILLEQTHRPSDKDEKQFGDARVVVPNDGSEQDEQRQPEVHQEPIDLNQPSDLNSVGSKTELSVEAAIQGKPKRLDQYVKQTSKPAEEKTASLDPGSRGNSEESGNFFDASDIQEGDDADWTRAEDFIKNGDRDDVELISCSAKGFVVSFGTLVGFLPYRNLLSKWKFLAFESWLRQKGLDPSMYKQNLVTVTNNDAENNNLSADPPLHTENDSKFEDKVSPDMKLEDLLRIYDQEKVNFLSSFIGQKTKAYVLLADRKLKKLIFSVKPKENEELTEKKRKLMARLQVGDIVKCRVQKIAYFGVFVEVEGVSALIHQSEISWDATLDPSNYFKIDQVIEAKVHQINSALGRIFLSLKEVTPDPLMESLESVFGDHESFGGRLEAAQTDAEWSEVESLIKELQKIEGVQSVSKGRFFRSPGLAPTFQVYMASIFADQYKLLARSGNRIQEVMVQTVLDKEEMKSAIMTCASRVE* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0815 968 MobiDBLite consensus disorder prediction 276 488 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 307 322 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 170 190 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 418 464 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 537 556 - -
Psa7g0815 968 SMART S1_6 782 852 IPR022967 -
Psa7g0815 968 SMART S1_6 624 763 IPR022967 -
Psa7g0815 968 SUPERFAMILY Nucleic acid-binding proteins 769 875 IPR012340 -
Psa7g0815 968 MobiDBLite consensus disorder prediction 568 610 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 500 536 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 579 603 - -
Psa7g0815 968 Pfam S1 RNA binding domain 781 852 IPR003029 GO:0003676
Psa7g0815 968 Gene3D - 764 855 IPR012340 -
Psa7g0815 968 MobiDBLite consensus disorder prediction 335 407 - -
Psa7g0815 968 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 968 - -
Psa7g0815 968 MobiDBLite consensus disorder prediction 500 556 - -
Psa7g0815 968 ProSiteProfiles S1 domain profile. 784 852 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0815 Psa-Chr7 59332754 59339760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0815 - - mtr:MTR_8g097290 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0815 7 59332754 59339760 Psa7g0815 7 59332754 59339760 ECH