Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0790 ATGGAGGAAGCTTCCGCAACAGCACCGCCACCACCAAAACCATCGTGTTGGAGTAGCATAGTGAAGAAGGAGGCACCGCCACCTCAACAACCGCCGCCACTTTTAGAGACTCAACAAGTTTTAGAAGATGCGCGCAACCGTCATGGGATATCTGTTTTGATTGTTGACGCTAATGCTGTTATTGCAGGCGGAGATAAGCTTCATGGAATTGCTGATAAGTTTGTGTCTGTCCCGGAAGTCTTGGAGGAAATCCGTGATCCTGTTTCTCGCCACAAGCTTTCTTTCCTTCCGTTCACTATCCAAACCATGGAGCCCACCCCTGAATCCATTAACAAAGTTGTCAAATTTGCTAGGGTTACTGGTGATCTACAGACTCTATCAGATGTTGATATCAAACTCATGGCTTTAACTTATACTTTGGAGGCTCAGATTCACGGAACAAAACATCTCAGAGACAGCCCTCCTCCAGTGCAAACCTTAAATGTTAAGAGATTGCCTGAGAAGGACTTGCCGGGATGGGGTTCGAATGTTCCCAATTTGGAAGAGTGGGAAGCACTGGAACGCGAAGAGGATAATACAAATTCAAATTCGAGAATCCTTCCTCTGCAGGACTTGAGTTTGAACATTGTTCCTCAAGATGATCTATCTGTAGATGGTTCAGTAGAGCATACAAGTGAAACTTCCTTGGAAATTCTAGAAGGTAGTGAACATTGTGGTTCAATGAGGCGTAAGAATTATCTGCCTAAGAAAAAAGCCATAAACATTGAAGGGAAGACAGTGGCTGATGGTGTTGATGCATCTCAAGGACAAGTTGATGACAATGAAGGTGATTGGATGCCTGCTGTTAGTCGTAGTACTCACAGGAGATTTCTAAGAAGGAAAGCTAGACGGGAATACTATGATGCATTATCCAGTAATCAAGATCAACAAGATATGGAAGAAAACATCGATGGAAGTGTTTGTGAAGATGACAAGACTTCGAACCGAGATGTTCACCAAGGTGATGATGAGAAGCATATTGAAAATGTTGTTTCCAAGGATGATATGATATTTGCAGAGAACAATGACGGTGAAGCCCTCTCTGCAACTCTGAAGCAAATGACACTGGAAGAAGGTTCACTTGAAGTTAATGAAGAAGACAAACCAAGTTTGTCTCCTGAAGAGCTGCAGTCAAACAATGATATACTACTTGAAAGTGCATCAGATCTCAGTGCATTTCACTCTGAGACTGCAAGTCAGACAAGTGAAGCTGCTGATGTTTCATATACAGGTGATGATACCAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAATCATCTGTAGCCTGTATAACTGGCGACTTTGCAATGCAAAATGTTCTTCTCCAAATGGGTTTGCGCTTGCTGGCACCTGGGGGATCACAGATACACCAGCTGCACAGATGGATACTTAAGTGTCACGCTTGCTTCACTGTTACTGCTGAAATTGGGAGGATTTTCTGTCCAAAATGTGGAAATGGTGGCACCTTAAGGAAGGTAGCTGTCACTGTTAATGAAAATGGAATAATGTTGGCAGCCCGTCGACCCCGAGTTACATTACGTGGCACAAAATTCTCATTGCCTTTACCCCAAGGCGGAAGGAATGCTGTCACAAAAAATGTTATTCTCCGGGAAGATCAACTGCCTCAAAGGGTACTTCATCCTAAAACAAGAAAGAAAGCCAACAAGGATGATGAGTTCTTTGGGCCAGACGATGTTTTCAGCCACCACAATTCTAAGGGATCTCCGTTCCTGCCTCCAGTCAGAAAAGCACTAGCAGTTTACAGTGGGAAGAGAAATCCAAATGACAATCACTACTCTTCAAAGCGGAAGTAG 1857 0.4356 MEEASATAPPPPKPSCWSSIVKKEAPPPQQPPPLLETQQVLEDARNRHGISVLIVDANAVIAGGDKLHGIADKFVSVPEVLEEIRDPVSRHKLSFLPFTIQTMEPTPESINKVVKFARVTGDLQTLSDVDIKLMALTYTLEAQIHGTKHLRDSPPPVQTLNVKRLPEKDLPGWGSNVPNLEEWEALEREEDNTNSNSRILPLQDLSLNIVPQDDLSVDGSVEHTSETSLEILEGSEHCGSMRRKNYLPKKKAINIEGKTVADGVDASQGQVDDNEGDWMPAVSRSTHRRFLRRKARREYYDALSSNQDQQDMEENIDGSVCEDDKTSNRDVHQGDDEKHIENVVSKDDMIFAENNDGEALSATLKQMTLEEGSLEVNEEDKPSLSPEELQSNNDILLESASDLSAFHSETASQTSEAADVSYTGDDTSEQSWMLRSLSESSVACITGDFAMQNVLLQMGLRLLAPGGSQIHQLHRWILKCHACFTVTAEIGRIFCPKCGNGGTLRKVAVTVNENGIMLAARRPRVTLRGTKFSLPLPQGGRNAVTKNVILREDQLPQRVLHPKTRKKANKDDEFFGPDDVFSHHNSKGSPFLPPVRKALAVYSGKRNPNDNHYSSKRK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0790 618 Pfam PIN domain of ribonuclease 53 140 IPR033411 -
Psa7g0790 618 Pfam Nin one binding (NOB1) Zn-ribbon like 470 540 IPR014881 -
Psa7g0790 618 PANTHER - 6 616 - -
Psa7g0790 618 SUPERFAMILY NOB1 zinc finger-like 470 533 IPR036283 -
Psa7g0790 618 MobiDBLite consensus disorder prediction 1 34 - -
Psa7g0790 618 Gene3D - 44 154 - -
Psa7g0790 618 PANTHER RNA-BINDING PROTEIN NOB1 6 616 IPR039907 -
Psa7g0790 618 CDD PIN_Nob1-like 53 165 IPR033411 -
Psa7g0790 618 PIRSF Nob1 36 618 IPR017117 GO:0000469|GO:0004521|GO:0042274
Psa7g0790 618 Gene3D - 464 538 IPR036283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0790 K11883 - gmx:100800291 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0790 7 57579904 57583880 Psa7g0790 7 57579904 57583880 ECH