Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0765 ATGGTAGGAAGAACATATAATTCACAAATCAATTATACAATTGCAACTTCTTGTCACCTTCTATTTCCAGCTCATTCATCTTATTCAGACTTTGACATGCCCCCTTCCCAACAGACCCACATTAACTTATTCATTAAATTTCATTTTTATTTATTTTTCTTTCCATTTTACATAATTAGAAAAATACCAATTTCTTCAATATTATCACCCTATCTTTTCTTGTATATCATTCTACCTACAAAAGCCTATTCATACCCCCACTTTCATTCATTCCATCTCAGTGTTCCAGTTTTCTTCTTCTTCTTTGAAATCATTAAAAACTTCATAATGAGAGAAATCCTTCATGTACAAGCTGGTCAATGTGGAAATCAAATTGGTGGAAAGTTTTGGGAGGTTATGTGTGATGAACATGGGATAGATCCTTCTGGAAGTTATGTAGGAAACTCACCCCTTCAACTTGAGAGGGTGAATGTTTACTACAATGAAGCAAGTGGTGGAAGATATGTTCCTAGAGCTGTTCTTATGGATCTTGAACCAGGTACTATGGATAGTTTGCGCTGCGGTCCGTTCGGAAAAATATTTAGGCCCGATAACTTCGTGTTCGGACAAAATGGAGCTGGTAATAATTGGGCTAAAGGACATTATACCGAAGGAGCCGAGCTTATTGATTCTGTCCTCGATGTTGTTCGTAAAGAAGCCGAGAATTGTGATTGCTTGCAAGGTTTTCAAATTTGTCATTCATTGGGAGGTGGAACTGGATCAGGAATGGGTACTTTGCTCATTTCAAAGATCAGAGAAGAGTATCCTGATAGAATGATGTTGACTTTCTCAGTGTTTCCTTCTCCGAAGGTCTCTGATACAGTCGTGGAACCCTACAATGCAACTCTCTCAGTTCATCAACTAGTTGAGAATGCTGATGAATGCATGGTTCTTGATAATGAAGCACTCTATGATATCTGTTTCAGAACTCTCAAGCTCACTAATCCAAGTTTTGGTGATTTGAACCATTTGATCTCAACAACAATGAGTGGAGTAACGTGTTGCCTTCGATTTCCCGGCCAACTCAACTCGGATCTTCGAAAACTAGCGGTTAATCTCATTCCTTTCCCACGTCTACACTTTTTCATGGTTGGTTTTGCGCCCTTAACATCAAGGGGTTCTCAACAATACAGTTCCCTCACAATTCCAGAACTGACACAACAAATGTGGGATGCAAGAAACATGATGTGTGCTGCAGATCCAAGACATGGTAGATACTTAACAGCCTCGGCAATGTTCCGCGGCAAAATGAGCACGAAAGAAGTTGATCAACAGATGATAAATGTTCAGAACAAGAACTCGTCTTACTTCGTCGAATGGATACCGAACAATGTGAAATCAAGTGTCTGTGACATTCCGCCAACGGGACTGTCGATGTCTTCGACGTTTATGGGGAATTCGACGTCGATACAAGAGATGTTTAGGCGTGTTTCGGAACAGTTTACTGTTATGTTTAAGAGAAAGGCTTTCTTGCATTGGTATACTGCTGAAGGTATGGATGAAATGGAGTTTACTGAGGCTGAGAGTAATATGAATGATTTGGTTGCTGAGTATCAACAATATCAAGATGCTGTTGCAGTGGAAGATGGTGAGGTTGATGAAGAGGAAGATGAGGAGGACATTGCTTAG 1668 0.3981 MVGRTYNSQINYTIATSCHLLFPAHSSYSDFDMPPSQQTHINLFIKFHFYLFFFPFYIIRKIPISSILSPYLFLYIILPTKAYSYPHFHSFHLSVPVFFFFFEIIKNFIMREILHVQAGQCGNQIGGKFWEVMCDEHGIDPSGSYVGNSPLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRCGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSSLTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTAEGMDEMEFTEAESNMNDLVAEYQQYQDAVAVEDGEVDEEEDEEDIA* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0765 555 PANTHER TUBULIN 110 553 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 249 255 IPR017975 GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 SMART Tubulin_C_4 355 492 IPR018316 -
Psa7g0765 555 PRINTS Beta-tubulin signature 150 167 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 197 208 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 217 235 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 261 273 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 321 333 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 339 348 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 354 367 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 374 390 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 420 438 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 438 452 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 456 479 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 486 497 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Beta-tubulin signature 521 539 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Psa7g0765 555 CDD beta_tubulin 111 535 - -
Psa7g0765 555 SUPERFAMILY Tubulin nucleotide-binding domain-like 110 352 IPR036525 -
Psa7g0765 555 PRINTS Tubulin signature 119 139 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 160 179 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 202 213 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 215 239 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 241 259 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 260 281 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 285 298 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 299 319 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 PRINTS Tubulin signature 479 507 IPR000217 GO:0005874|GO:0007017
Psa7g0765 555 Gene3D Tubulin/FtsZ, GTPase domain 110 371 IPR036525 -
Psa7g0765 555 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Psa7g0765 555 Gene3D - 372 482 IPR037103 -
Psa7g0765 555 Gene3D Helix hairpin bin 483 538 IPR023123 -
Psa7g0765 555 SUPERFAMILY Tubulin C-terminal domain-like 353 537 IPR008280 -
Psa7g0765 555 SMART Tubulin_4 156 353 IPR003008 GO:0005525
Psa7g0765 555 Pfam Tubulin/FtsZ family, GTPase domain 112 320 IPR003008 GO:0005525
Psa7g0765 555 Pfam Tubulin C-terminal domain 370 491 IPR018316 -
Psa7g0765 555 Coils Coil 517 551 - -
Psa7g0765 555 PANTHER TUBULIN BETA CHAIN 110 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0765 Psa-Chr7 56352709 56355717 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0765 K07375 - gmx:100797652 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0765 7 56352709 56355717 Psa7g0765 7 56352709 56355717 ECH