Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0747 ATGGATTTGCCATTTCTCACTCTTCCACACTTTCTCTCCCCTCCAATTATCAAACCCAAACAATTTCTTCTTCCATTTCCTTCTAGACCTTTCTATCGTCCCTTATCCTTTCCGTTACTTCCTCTTGGACCTCCCGCCGCAGCCCGACCCAACGCCAAATTCTATCCAAACCCAGCCGACGACGACCCGCCCGAAGTAGCCGAAGACACCGCTCACGGCTACTCCAAGTACCAACAAATCCAACTCCAAGCCGACCGCGCTCGCCTACGCGAAGAAGAGGATTTCAAAAACAACCAAGCCACTTACCTCGCCGCCATCGCCGACGCCGAAGATGCTCCCGACGAAGCTTCCTCTATTGAATCCTCTCAAGACGATTTGTTCGGTGAAATCGACAAAGCTATTGCTCTCAAACGCAAAGAGTTCGTTAAACAAGGTCTTCTCAAACCTAATCCCGCCAAAAAGGAAATTGAAGAAGTCGTTAAGGAAGAGCTTCAACCCGATGAAGTCGACGATGTCGAAGAAATCGAGCGACTCAAGGGAATTGCCGTGAATTCCGATGAAACTTCGGGAGATTTCACTGAAGATGGTGATTTAGGTTCTAATTCTGGTTCTTCGTTTGATTTAGATTTTGATAGTTTAGGGAAGAGTAGTAAAGCTAGAATAGTTGAACCTAAGTTTAAGATGAGTTTGGCTGAGCTTTTAGATGAGAGCAAAGTAGTTCCTGTTTTGGTTTTCGGAAATTTAGAAGTTGAAATTAGTGGAATTCAACACGATTCTAGGCTTGTAACTTCTGGTAATTTGTTTGTGTGCTGTGTTGGAAGTAAAAACGATGGACATATGTTCTTGAGTGAGGCTGATAAAAGAGGAGCTATTGCTGTTGTGGCTAGTAAAGAGATTGATATTGAAGATACTTTGGGTTGTAAGGCTTTGGTTATTGTGGAAGATACTAATGAAGTTCTTGCTACATTGGCTGCTTCTTTTTATAAGTATCCTTCTAAAAACATGGCTCTTATTGGTATAGCTGGGACTTATGGTAAAACAACAACTACCTATTTGATTAAAAGTATGTACGAAGCGATGGGTTTACGCACCGGGATGTTTAACTCTATTGCTTGTTATGTTCATGGGGATAATCAGTTGGATTCGCCTTATGCGACGCTGGATGCTGTTTTGGTTCAGAATTTGATGGCTAAGATGCTTCATAATGGAACTGAATCTGTGGTTTTTGAGGCTTCTTCTCGTGGATTAGCGCAGGGGAAATATGATGAGGTTGATTTTGATGTTGCTGTTTTTACAAATTTGATGGCTGGTGATGACGAGGAAGAGGATAGAGATTCAAATGCTAAGCTATTTTCAAGGATGGTGGATCCTGAGCGGCATAGGAAAGTTGTTAACATAGATGATCCGAATGCGCCTTCGTTCGTTTCATTGGGGAATCCTGAAGTTCCTGTGGTGACATTTGCTTTGCAGAATAAAAATGCAGATGTTCATCCCTTTAAATTTGAACTCTCCCTGTTTGAGACGCAGGTGTTGGTTAATACACCGGCTGGAATACTGGAAATTTCGTCCGGTTTACTAGGAAGGCACAATGTTTACAATATTCTTGCTGCTGTGGCAGTTGGCATTGCTGTTGGGGCACCCTTGGAGGACATTGTTAGAGGGATTGAAGAGGTTGATGCAGTTCCTGGTAGGTGTGAGTTAATTGATGAGGAACAAGCATTTGGGGTAATAGTGGACTATGCTCGAACTCCTGATGCTTTGTCTAGATTACTTGATTCTGTAAGAGAGCTTCAACCTCGCAGGATTATAACTGTGATTGGTTCTTGTGGCGAGGATGAAAGGGGGAAGAGACCCTTGCTGACAAAGATAGCAACAGATAAAAGTGAAGTGACCATGCTAACATCGGACAATCCCAAGACTGAAGATCCATTGGATATTTTGGATGATATGTTGGCTGGGGTAGGATGGACAATGCAAGAGTACCTGAAATATGGAGAAAATGACTACTATCCTCCTCTTCCGAATGGTCATAGGCTTTTTCTCCATGACATTAGAAGTGTAGCTGTGCGAGCTTCAGTTGCAATGGGGGAGGAGGGTGATGTTGTTGTGATTGCTGGTAAAGGCCATGAAACATATCAAATGGAAGGTGAAAAAAGAGATTTCTTCGATGACCGAGAAGAGTGCAGGGAGGCATTGCAGTACGTTGACGAGCTTCACCAAGCTGGAATAGATACAAGCGAATTTCCATGGAGGTTACCAGAGAGCCACTGA 2271 0.4328 MDLPFLTLPHFLSPPIIKPKQFLLPFPSRPFYRPLSFPLLPLGPPAAARPNAKFYPNPADDDPPEVAEDTAHGYSKYQQIQLQADRARLREEEDFKNNQATYLAAIADAEDAPDEASSIESSQDDLFGEIDKAIALKRKEFVKQGLLKPNPAKKEIEEVVKEELQPDEVDDVEEIERLKGIAVNSDETSGDFTEDGDLGSNSGSSFDLDFDSLGKSSKARIVEPKFKMSLAELLDESKVVPVLVFGNLEVEISGIQHDSRLVTSGNLFVCCVGSKNDGHMFLSEADKRGAIAVVASKEIDIEDTLGCKALVIVEDTNEVLATLAASFYKYPSKNMALIGIAGTYGKTTTTYLIKSMYEAMGLRTGMFNSIACYVHGDNQLDSPYATLDAVLVQNLMAKMLHNGTESVVFEASSRGLAQGKYDEVDFDVAVFTNLMAGDDEEEDRDSNAKLFSRMVDPERHRKVVNIDDPNAPSFVSLGNPEVPVVTFALQNKNADVHPFKFELSLFETQVLVNTPAGILEISSGLLGRHNVYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYARTPDALSRLLDSVRELQPRRIITVIGSCGEDERGKRPLLTKIATDKSEVTMLTSDNPKTEDPLDILDDMLAGVGWTMQEYLKYGENDYYPPLPNGHRLFLHDIRSVAVRASVAMGEEGDVVVIAGKGHETYQMEGEKRDFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0747 756 SUPERFAMILY MurD-like peptide ligases, catalytic domain 310 572 IPR036565 GO:0005524|GO:0009058
Psa7g0747 756 SUPERFAMILY MurE/MurF N-terminal domain 228 331 IPR035911 -
Psa7g0747 756 Pfam Mur ligase middle domain 340 540 IPR013221 GO:0005524|GO:0009058|GO:0016881
Psa7g0747 756 Pfam Mur ligase family, glutamate ligase domain 561 644 IPR004101 GO:0009058|GO:0016881
Psa7g0747 756 Gene3D - 331 564 IPR036565 GO:0005524|GO:0009058
Psa7g0747 756 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 250 733 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Psa7g0747 756 Gene3D - 229 329 - -
Psa7g0747 756 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 228 732 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Psa7g0747 756 Gene3D - 566 743 IPR036615 GO:0009058|GO:0016881
Psa7g0747 756 PANTHER MUR LIGASE FAMILY MEMBER 205 746 - -
Psa7g0747 756 Pfam Mur ligase family, catalytic domain 251 328 IPR000713 GO:0009058|GO:0016881
Psa7g0747 756 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 561 733 IPR036615 GO:0009058|GO:0016881
Psa7g0747 756 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 205 746 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0747 - - mtr:MTR_8g098345 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0747 7 55718044 55721971 Psa7g0747 7 55718044 55721971 ECH