Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0597 ATGGCCTCACATCTCTGCAAATCCGCTTCCAGAGCCGCTAGGTCTCTTCTCTCCGCTTCTTTCCACTCTCAAGGACGCGCCGTAGCGGCGGCTGCAGCTGTTGCATCCATTAGGAAGGTTCCGGTTTTTGCTCCAAATTACAGGAGAACTGGTTCTGGAAATGGATCTAGCTCCTGGATTGCTGGAGCACTCGCTCTTCCGGCTGCAGCTTACATGCTCCAAGATCAGGAGGTGCATGCTGCCGAGCTGGAGCGCACTTTCATTGCCATCAAGCCTGACGGAGTGCAAAGAGGGCTGATTTCAGAGATTATTTCTCGTTTCGAGAGGAAAGGGTTCAAGCTTGTGGGAATCAAAGTATTGATTCCGACAAAGCAATTTGCCCAACAGCATTATCACGACCTAAAAGAAAGACCCTTCTTCAATGGATTGTGCGACTTCCTGAGCTCTGGCCCTGTTATTGCAATGGTATGGGAAGGAGAGGGAGTTATTACCTACGGCCGTAAACTAATTGGAGCCACAGATCCACAGAAATCAGCGCCTGGAACCATTAGGGGTGATCTGGCTGTTGTTGTTGGAAGAAATATCATCCACGGGAGCGATGGTCCAGAAACAGCAAAGGATGAGATAAAGTTGTGGTTTAAGCCAGAGGAATTGGTTAGTTTCACAAGCAATTCAGAGAAGTGGATTTATGGCGACAACTGA 702 0.4886 MASHLCKSASRAARSLLSASFHSQGRAVAAAAAVASIRKVPVFAPNYRRTGSGNGSSSWIAGALALPAAAYMLQDQEVHAAELERTFIAIKPDGVQRGLISEIISRFERKGFKLVGIKVLIPTKQFAQQHYHDLKERPFFNGLCDFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSAPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVSFTSNSEKWIYGDN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0597 233 Gene3D - 82 233 IPR036850 -
Psa7g0597 233 SUPERFAMILY Nucleoside diphosphate kinase, NDK 83 230 IPR036850 -
Psa7g0597 233 Hamap Nucleoside diphosphate kinase [ndk]. 83 218 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 4 233 - -
Psa7g0597 233 CDD NDPk_I 84 213 - -
Psa7g0597 233 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE-RELATED 4 233 - -
Psa7g0597 233 PRINTS Nucleoside diphosphate kinase signature 86 108 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 PRINTS Nucleoside diphosphate kinase signature 130 149 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 PRINTS Nucleoside diphosphate kinase signature 150 167 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 PRINTS Nucleoside diphosphate kinase signature 171 187 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 PRINTS Nucleoside diphosphate kinase signature 194 213 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Psa7g0597 233 SMART ndk_5 83 220 IPR034907 -
Psa7g0597 233 Pfam Nucleoside diphosphate kinase 84 217 IPR034907 -
Psa7g0597 233 ProSitePatterns Nucleoside diphosphate kinases active site. 194 202 IPR023005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0597 Psa-Chr7 39626268 39629877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0597 K00940 - cam:101499802 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0597 7 39626268 39629877 Psa7g0597 7 39626268 39629877 ECH