Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0546 ATGGTATGCATTGGCTTTTCTAGTACATGTCTTTTTGAGGTATCTTTGGTTCAGCATGAAGGTCTTAGATTTTCTCAAAGAATACAAATGCTTTCAACTGCATGCATGCCAAAAAGCTACACTTTAGCTACAACCAAGAAATGCAAAATAATCAAGGCCATGGCTTCTCCAAATGTAGCAGCTCCTCAAAGAGAGAAAGATCCAAAAAAGAGAGTAGTAATAACAGGAATGGGTCTTGTGTCAGTCTTTGGTAGTGACATAGATGTATTTTACAACAAGCTTCTTGAAGGAGAAAGTGGAATAAGCCTAATAGATAGGTTTGATGCTTCAAGCTTCCCCGTCCGCTTTGGCGGTCAGATACGCGATTTTTCTTCACAAGGTTATATTGATTGCGAGAATGATCGGCGCCTCGATGATTGCTCGAGGTATTGTTTAGTAGCAGGCAAGAGGGCACTTGAAGATGCTAATCTTGGATATGAAGCCCTCAACATTATGGACAGAACAAGAATGGGAGTACTGGTGGGAACAGGAATGGGAGGTGTAAGTAGTATTAACACTGCTGTTGATGCTCTCACTCATAGAGGGCATGAAAAGATTAATCCATCTTTCATTCCCTACACCATTAACATGAGTTCTGCTTTGTTGGCTATAGACACAGGACTAATGGGACCAAACTATTCAATTTCCACTGCTTGTGCTACAGCAAATTACTGTTTTTCTGCAGCTTCTCATCACATTAGAAGTGGTGAAGTGGATATTATGGTGGTTGGTGGTACTGAAGCTTCGATTATACCTTCTGGTGTTGGAGGATTCATTGCTTGCAGGGCTTTGTCTCAGAGGAATGATGAGCCTAAGAAGGCTTCAAGACCGTGGGACAAAAATCGCGACGGTTTTGTCATTGGCGAAGGCTCTGGTGTCCTGATAATGGAGAGCTTGGAGAGTGCAACAAAGAGAGGAGCAAGAATAATTGCTGAATATTTGGGTGGTGCCATAACATGTGATGCTCATCACATGACTGATCCAAGATCTGACGGACTTGGAGTTTCATCTTGCATAAGCAAGAGTTTACAAGACGCCGGTGTTTCCCCTGAAGAGGTGAATTATGTGAATGCTCATGCTACATCAACACTAGCTGGTGACTTGGCTGAGGTTAATGCAATCAAAGAGGTTTTTAAGGATACATCAGAACTAAAAATGAATGGGACTAAGTCAATGATTGGCCATTGTCTTGGTGCGGCTGGTGGTTTGGAAGCTATAGCAACTATCAAAGCAATAACTAGTGGCTGGTTGCATCCAACCATTAACCAAGATAATTTGGAAGAGGATGTTACAATTGACACAGTACCTAATTTTAAGAAAAGGCATGAAGTTAATGTTGCTATCTCCAATTCATTTGGATTTGGTGGACACAATTCAGTAGTTGTCTTTGCCCCATTCAAACCCTAA 1446 0.4156 MVCIGFSSTCLFEVSLVQHEGLRFSQRIQMLSTACMPKSYTLATTKKCKIIKAMASPNVAAPQREKDPKKRVVITGMGLVSVFGSDIDVFYNKLLEGESGISLIDRFDASSFPVRFGGQIRDFSSQGYIDCENDRRLDDCSRYCLVAGKRALEDANLGYEALNIMDRTRMGVLVGTGMGGVSSINTAVDALTHRGHEKINPSFIPYTINMSSALLAIDTGLMGPNYSISTACATANYCFSAASHHIRSGEVDIMVVGGTEASIIPSGVGGFIACRALSQRNDEPKKASRPWDKNRDGFVIGEGSGVLIMESLESATKRGARIIAEYLGGAITCDAHHMTDPRSDGLGVSSCISKSLQDAGVSPEEVNYVNAHATSTLAGDLAEVNAIKEVFKDTSELKMNGTKSMIGHCLGAAGGLEAIATIKAITSGWLHPTINQDNLEEDVTIDTVPNFKKRHEVNVAISNSFGFGGHNSVVVFAPFKP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0546 481 TIGRFAM fabF: beta-ketoacyl-acyl-carrier-protein synthase II 70 476 IPR017568 GO:0006633|GO:0016747
Psa7g0546 481 CDD KAS_I_II 70 476 IPR000794 -
Psa7g0546 481 Pfam Beta-ketoacyl synthase, N-terminal domain 70 315 IPR014030 -
Psa7g0546 481 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE II 34 481 - -
Psa7g0546 481 SUPERFAMILY Thiolase-like 283 477 IPR016039 GO:0016746
Psa7g0546 481 PANTHER POLYKETIDE SYNTHASE-RELATED 34 481 IPR000794 -
Psa7g0546 481 SUPERFAMILY Thiolase-like 70 320 IPR016039 GO:0016746
Psa7g0546 481 Gene3D - 38 481 IPR016039 GO:0016746
Psa7g0546 481 Pfam Beta-ketoacyl synthase, C-terminal domain 324 436 IPR014031 -
Psa7g0546 481 SMART Beta-ketoacyl synthase 72 481 IPR020841 -
Psa7g0546 481 ProSitePatterns Beta-ketoacyl synthases active site. 223 239 IPR018201 GO:0004315|GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0546 Psa-Chr7 37018653 37022519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0546 50 481 Acyl Lipid Metabolism Gene Families AT5G46290 71.938 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0546 K09458 - gmx:100808453 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0546 7 37018653 37022519 Psa7g0546 7 37018653 37022519 ECH