Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0541 ATGCCAGGTCTCGTTTCCCCAGGCGGACCTCCGCCCCGAATCACCGTACCCGAAACCCCACCCCAAAGATCCGACTCCGCCAAAACACCTCCCTCCCCATCACCACTCCCCAAAAAACCACCCTCTCCTTCTCCCTCCTCCCGCTCCAAAAAGAAAACACCAGAAACCCCAACCAACACTAACACTCTCCTCTCCGAAGCCTCACTCGATAACCCAGATCTAGGCCCATTCCTCCTTAAAGTAGCCCGTGACACCATCGCGTCCGGCGACGGCCCTGCCAAAGCCCTAGACTACGCCATCCGAGCTTCCAAATCCTTCGAACGCTGCGCCGTCGAAAACGAGCCCAGTCTCGACTTAGCCATGAGCCTACACGTCTTAGCCGCGATTTACTGTAGTTTAAGCCGCTTCGAAGAAGCTGTACCTGTTCTCGAACGCGCGATCCTTGTTCCTGATGTCGAACGCGGCGCCGATCACGCTCTCGCTGCTTTCTCAGGCTATATGCAGTTAGGTGATACTTTTTCTATGCTAGGTCAAGTTGATAAGTCGATTTCTTGTTACGATCAAGGTCTTCAGATTCAGATTCAGACGCTAGGTGAAACGGATCCGCGTGTTGGTGAAACGTGTAGGTACTTGGCGGAGGCGAATGTTCAGGCGATGCAGTTTGATAAAGCGGATGAGCTTTGTAATAAGACGTTGGAGATTCATCGTGCGCATAGTGAGCCTGCTTCTCTTGAGGAGGCTGCAGATCGGAGACTCATGGCGTTGATTTGTGAGGCGAAAGGAGATTATGAGCCGGCGTTGGAGCATCTTGTTTTGGCGAGTATGGCGATGATTGCCAACGGTCAGGATACGGAAGTTGCTTCGATTGATGTAAGCATTGGGAATATTTATATGTCTCTGTGTCGATTTGATGAAGCTATATTCTCTTATCAGAAAGCGCTTACCGTGTTTAAATCGTCGAAAGGGGAGAATCATCCATCGGTTGCGTCTGTGTTTGTTCGCTTGGCTGATTTGTATCATAGGACTGGGAAGCTTCGTGAATCGAAATCTTATTGCGAAAATGCGCTTAGGATATACTCGAAACCGGTTCCTGGAACTACTGCGGAGGAGATTGCTGGTGGTTTGACGGAGGTTTCGGCTATATTTGAATCTGTCGATGATCCGGAGGAGGCGTTGAAGCTGTTGCAGAAGGCTATGAAATTGTTGGAGGATAAACCTGGACAGCAGAGCACGATTGCGGGTATAGAAGCACGGATGGGAGTGATGTATTACATGGTTGGGAAATATGATGAGGCCAGAAGTGCGTTTGAGAGTGCTGTGTTGAAATTGAGAACCAGTGGGGAAAGGAAATCTGCTTTTTTTGGTGTTGTTTTGAACCAAATGGGATTGGCTTGCGTGCAATTGTTTAAGATTGATGAAGCGGCTGAATTGTTTGAGGAAGCTAGAGGAATTCTTGAACAAGAATGTGGACATTGTCATCAAGATACTCTTGGAGTTTATAGCAATCTTGCAGCAACTTATGATGCAATGGGAAGGGTTGGAGATGCAATTGAAATCTTAGAATATGTTCTAAAATTGAGGGAAGAGAAGCTTGGAATAGCGAATCCTGATTTTGAAGATGAGAAGCGTCGTTTGGCTGAGTTGCTGAAAGAAGCTGGAAAGACAAGAGACAGAAAAGCAAAATCTTTGGAAAATCTAATTGATCCAAATTCAAAGAGGACAAAGAAGGAGAGTACCAAGAGGTGGCCTGGTTTGGGGTTTAGAATTTAA 1770 0.474 MPGLVSPGGPPPRITVPETPPQRSDSAKTPPSPSPLPKKPPSPSPSSRSKKKTPETPTNTNTLLSEASLDNPDLGPFLLKVARDTIASGDGPAKALDYAIRASKSFERCAVENEPSLDLAMSLHVLAAIYCSLSRFEEAVPVLERAILVPDVERGADHALAAFSGYMQLGDTFSMLGQVDKSISCYDQGLQIQIQTLGETDPRVGETCRYLAEANVQAMQFDKADELCNKTLEIHRAHSEPASLEEAADRRLMALICEAKGDYEPALEHLVLASMAMIANGQDTEVASIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIAGGLTEVSAIFESVDDPEEALKLLQKAMKLLEDKPGQQSTIAGIEARMGVMYYMVGKYDEARSAFESAVLKLRTSGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGHCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPNSKRTKKESTKRWPGLGFRI* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0541 589 SUPERFAMILY TPR-like 162 360 IPR011990 GO:0005515
Psa7g0541 589 MobiDBLite consensus disorder prediction 1 69 - -
Psa7g0541 589 MobiDBLite consensus disorder prediction 46 68 - -
Psa7g0541 589 Pfam Tetratricopeptide repeat 457 529 - -
Psa7g0541 589 Pfam Tetratricopeptide repeat 286 360 - -
Psa7g0541 589 SMART tpr_5 163 196 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 205 238 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 287 320 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 413 446 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 372 405 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 497 530 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 329 362 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 455 488 IPR019734 GO:0005515
Psa7g0541 589 SMART tpr_5 120 153 IPR019734 GO:0005515
Psa7g0541 589 Pfam MalT-like TPR region 125 275 IPR041617 -
Psa7g0541 589 Gene3D Tetratricopeptide repeat domain 63 273 IPR011990 GO:0005515
Psa7g0541 589 Coils Coil 538 558 - -
Psa7g0541 589 MobiDBLite consensus disorder prediction 1 44 - -
Psa7g0541 589 PANTHER - 20 588 - -
Psa7g0541 589 Gene3D Tetratricopeptide repeat domain 274 455 IPR011990 GO:0005515
Psa7g0541 589 Gene3D Tetratricopeptide repeat domain 456 581 IPR011990 GO:0005515
Psa7g0541 589 SUPERFAMILY TPR-like 414 555 IPR011990 GO:0005515
Psa7g0541 589 ProSiteProfiles TPR repeat profile. 287 320 IPR019734 GO:0005515
Psa7g0541 589 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 20 588 - -
Psa7g0541 589 MobiDBLite consensus disorder prediction 554 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0541 Psa-Chr7 36549338 36552349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0541 - - gmx:100815100 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0541 7 36549338 36552349 Psa7g0541 7 36549338 36552349 ECH