Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0538 ATGGCGATCTCATCACAATCTTTCTCACCTTCCTTCATCTTAACTCGCCACGATTCAACTCGCCCAACTCGTCTTCCCTCTCGATTCACCTTCACTCACTTCCGCAAAATCCAAACCCGCTCTGCATCCCCTCGATTCTCCGTTTCTTCACGTCTTAACTCGTCTAAATCCTCCGATGCCGGCGGTTCCATCTCGCCGGATAACGGCGATGTCACCTACGAGCTCCACCACGATCTCTCGCCGCAGCGTCGGAGACGCGGATCGCCGGTTTTTGTGACGCTTCCGGTGAAATCCATAGGGAGAGAGGGGAAGATATGGAGGCCGAAAGCGATGATGCTGTCGTTGAAGGCGATGGCTGCTGCGGGTGTGGAAGGAGTTGTGGTGGAGATTTGGTGGGGGGTGGTTGAGAGGAATGAGCCTAGGGTTTATGATTGGCGAGGGTATCGGGAGCTTGTTATGATGGCTTGCATGTGTGGTCTCAAAGTTCGTGCTGTTCTCGCATTTCATCAACATGGAACAGACGGTGATGATCTTAATGGGATACCACTTCCTTTATGGGTGCTTGATGAGATGCAAAAGGATCCGGATTTAGCATTTTCTGATAGGTTTGGAAGAAGAAATACTGAATACATTTCCCTTGGGTGTGATATTCTTCCTGTGCTGCGTGGGCGTTCTCCCATTCAAGTATATGCAGATTTTATGAGGGACTTCAGGGACACCTTTAGGCCTTTTCTTGGCACTATCATTACAGGAGTGCAGATTGGCATGGGTCCTGGTGGTGAACTAAGATATCCTTCATTGTCTTTACAAAAGCTAAATTTGGATTGGTCTCGAGAACTTGGAGAGTTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTAAACGCCTCTGCCCGAAATATTGGAAAGCGTGAATGGGGAAATGGTGGTCCATCTGGTGCTGGAAGTTTGATCCAAAATCCTGAGCGTACTGAATTCTTTAGAAACGAGGGTGGCTCTTGGAACATGCCATATGGTAAATTTTTTCTTGAATGGTACTCGGATATGCTGCTACTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCACATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCGGAGGTAACAGCAGGCTATTATAATACTTTTAAAAGGGACGGATACTTACCAATTTTACGCATGTTTAGTAAATATGGATTCTCGATGTGCTGCTCTTGTTTTGAAATGCAAGATATAGTTATGAAGAAGATCAATCCAGATTGTAGCCCCGAAGGTTTTCTTAGACAACTTTTGCTGGATGCTAGGCTCTGTGACATATCACTTGAAGGTCAAAATTTCTCAACTGATTTGGATGATGATGGATTCACTCAGGTCCTAAAGATGTCAAAATATTACTCAGATGGCATCGAGAGACGCCCCTTCTCATTCAACTTTGTAAGAATGGACAAAAATATGTTTGAACCCCGAAATTGGGACCGGTTTACTCGATTTGTGAGACGAATGTCTGATGGAAACATGTTTCGAGCCCGATTAAATTCTGTAGGAAAGCTACGGTTGAAAACTACAGTGGCTGCAGAAGTTGGATTGTTATACCAGCTTTACCAGTACTCTTGA 1665 0.4511 MAISSQSFSPSFILTRHDSTRPTRLPSRFTFTHFRKIQTRSASPRFSVSSRLNSSKSSDAGGSISPDNGDVTYELHHDLSPQRRRRGSPVFVTLPVKSIGREGKIWRPKAMMLSLKAMAAAGVEGVVVEIWWGVVERNEPRVYDWRGYRELVMMACMCGLKVRAVLAFHQHGTDGDDLNGIPLPLWVLDEMQKDPDLAFSDRFGRRNTEYISLGCDILPVLRGRSPIQVYADFMRDFRDTFRPFLGTIITGVQIGMGPGGELRYPSLSLQKLNLDWSRELGEFQCYDKYMLASLNASARNIGKREWGNGGPSGAGSLIQNPERTEFFRNEGGSWNMPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYVTQSHPSEVTAGYYNTFKRDGYLPILRMFSKYGFSMCCSCFEMQDIVMKKINPDCSPEGFLRQLLLDARLCDISLEGQNFSTDLDDDGFTQVLKMSKYYSDGIERRPFSFNFVRMDKNMFEPRNWDRFTRFVRRMSDGNMFRARLNSVGKLRLKTTVAAEVGLLYQLYQYS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0538 554 Gene3D Glycosidases 80 544 - -
Psa7g0538 554 Pfam Glycosyl hydrolase family 14 91 514 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 MobiDBLite consensus disorder prediction 45 65 - -
Psa7g0538 554 PANTHER - 32 538 IPR001554 GO:0000272|GO:0016161
Psa7g0538 554 PANTHER BETA-AMYLASE 32 538 - -
Psa7g0538 554 MobiDBLite consensus disorder prediction 45 67 - -
Psa7g0538 554 SUPERFAMILY (Trans)glycosidases 87 544 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0538 Psa-Chr7 36468193 36471386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0538 73 525 Glycoside Hydrolase AT4G17090 47.921 2.04e-150 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0538 K01177 - gmx:100805981 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0538 7 36468193 36471386 Psa7g0538 7 36468193 36471386 ECH