Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0252 ATGAGGAGGAGTAAGAAAATTCCCATTAATTTGGAAGAAGCTTCAGTGAACTTGTTAAAGTTGAAGGATAATAATTCAAGGATTTCATACTTTCTTATTCTCATTTTGATTGCTTGGTTTGTTCACAAATGGATCTTCTCTTTCTCCAATTGGTTTCCATTTGCACTTGCTCTTTGGGCTTCTTCACAATATGGGAGTTACCAGAGGAAACTACTTGAGGAAGACTTGAACAAGAAATGGAATCGTATAATAGTCAATTCCTCGCCTGTCACAACATTGGAACAATGTGAGTGGTTGAATCAACTATTGATGCAAATTTGGTCCAACTATTTTAATCCTAAGCTCTCAAATAGGTTATCAGCCATAGTAGAGAAACGTTTAAAGCTGCGGAAACCAAGATTTATAGAAAGAGTTGAGGTGCAGGAATTTTCACTTGGATCACGCCCTCCCAGTTTGGGCCTTCAAGGGGTTAGATGGTCAACCTCTGGTGATCAGCGAGTCCTGAAAATGGGTTTTGATTGGGACACAAGTGAGATGAGCATTTTGATGGTTGCTAAACTTTCTGTTGGTGCTGCCAGAATTGTGATTAACAGTCTTCATATTAAGGGTGATCTTCTTGTCACACCAATTTTAGATGGAAAAGCACTTTTGTACTCATTTGTATCAACACCTGAGGTTAGAATAGGAATTGCCTTTGGAAGCGGAGGCAGCCAATCAGCCACTGAGTTGCCTGGTGTTTCTCCTTGGCTGGTTAAGCTTTTTACCGACACTTTGGTAAAGACCATGGTGGAGCCTAGGCGCCGCTGTTTCAGTTTGCCTGTAGTTGATTTAAGGAAACATGTTGTTGGTGGCATGATATATGTTTCAGTGATTTCCGCAAACAGACTTTCTAGGAGTTCCTTTAAGGGGAGGCAACAAAGTGGCACAAGCAATGGCTGTTTAGAAGACAACTTGAGTGACAAGGACTTACAGACATTTATAGAGGTAGAAGCAGAGGAGCTGACAAGGAGAACGGGTGTGAGCCCGGGTTCAACTCCAAGATGGGATACAACATTTAATATGGTTTTACATGATAATACAGGAATAGTTCGCTTCAATCTTTACGAGTGCCCTCCCAACAGTGTCAAGTATGACTACCTAGCATGTTGCGAAGTTAAGATGAGGCACGTGGAGGATGATTCAACAATAGTGTGGGCAATAGGGCCTGATTCTGGTGTAATAGCAAAACATGCAAAACTTTGTGGAGAGGAAGTTGAAATGGTTGTCCCATTTGAGGGGACCAACTCAGCAGAGTTAAAGGTGAGAATTGTAGTAAAAGAGTGGCAATTCTCTGATGGTTCTCATAGTTTGACCAACCTCGACGCCAATCCTCAGAAATCACTAAAGGGATCATCAAATCTTCTTTCAAAAACTGGAAGGAAACTTAAGATAACTGTCGTGGAAGCAAAGGATCTAGCGGCGAGTGACAAATTTGGAAAGTTTGATCCTTACGTTAGGTTGCAGTATGGAAAGGTTGTTATGAAAACAAATATTGCTCCTCCTCCTCCTACTTCAACTCCTGTCTGGAATGAAACTTTTGAAGTAGATGAGAAGAATGGCGATGAATACCTAATTGTGAAATGCTTTAGTGAAGAAATTTTTGGAGACGAAAACATTGGTAGTGCACATGTAAATTTGGAAGGACTCGTGGAAGGGTCAATCAGGGATGTATGGATCCCACTTGAAGGAGTGAGTTCTGGCGAATTAAGACTTAAAATTGAAGCAATTAGGGTGGACAGCAAAGAGGGATCAAAGGGTCCAGCTTCGGGCACGGCCAATGGTTGGATTGAACTTGTTCTTATTGAAGCGAGAGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTATGTGAGGGTAACCTATGGAAACTTGAAGAAAAGAACAAAGGTTGTACACAAAACTCTCAACCCTCGTTGGGACCAGACCTTAGAGTTCCAAGACGATGGAAGTCCCCTGATACTGCATGTGAAAGACCATAATGATTTCCTACCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAGGGCTTCCTCCGAACCAAATGTCTGACAAGTGGATACCTCTCCAAGGAGTGAAAAGCGGTGAAATCCACATCCGAATCACAAGAAAAGTTCCAGAGATGCAAACCAGACAATCTCTAGACTCTGAACATTCTTTGACTAAATTACACAAGATTCCTAGCCAGATAAAGGAGATGACGAAAAAGATCCGGTCTTTAATAGAGGAAGGAAATCTGGAAGAGCTGTCTACAAGTTTGAGCGAGTTACAAACTCTAGAGGATACACAAGAAGGATATATAGCCCAGTTGGAGACTGAACAAATGCTCCTTATCAGCAAAATAAATGAACTGGGCCAAGAAATCATCAATTCTTCTTCTCTCAAAAGAAGTCAAGGTTTTGTTGCTTCCGCCTCGTTCCATGGCCCTCGTGTAGGTCAAGGTTTTGTTGCTTCCGCCTCGTTCCATGGCCCTCGTGTAGGTCACGGTTTTGTTGCTTCCGCCTCGTTCCATGGCCCTCGTGTAGGTCACGGTTTTGTTGCTTCCGCCTCGTTCCATGGCCCTCGTGTAGGTCACGGTTTTGTTGCTTCCGCCTCGTTCCATGGCCCTCGTATATCGACAATACTGAATCTGAAGCCACTCACTTTCCCATCCAAATTCAAATTCACACTTTTCATTCTCAAATCTTTCTCTTCTCTCTCAACTATATCCAATCACAACAACGATAAACCATCCAATGCAATCGATCGAATCCTTCTCCGCTTTCGCAATCTCTCTCATCATCACGATGTTGATGAACCGACTCAAACCCTACCGCCACATCAATTTTTGCACCGCCAATGGCTTCGCTCCGATGACGCGGTTTTTCCATCGGAGAACCAAGTTGATCAACACCAACAAGAGAAAGTATTCAAGAAGAAAAAGAAGAAGAACGAAGCAATGGCACCGTGTTTGTCGGAAGAAGAACTGACTCGATTGCGAACAATCGGAATGCATCTCAAGGAGAAAATCAGTATCCCTAAATCTGGTCTCACGCGTCCTGTGCTCCACAAAATTCATCATCGGTGGAACAATAATGAGTTGGTGAAGCTCAAGTTTCATGAGTTTCTTTCTCAGAATATGAACCTTGCGCATAACATCGTTCAGCGTCGAACCGGAGGATTAGTTATATGGAGGTCAGGAAGTGTTATGTGGGTGTACCGTGGCGACAACTATCAAGGGCCAGCAACCAATGCCAAACATAATTCACAGAGTGAGTCAGTTGTGTGTAATCAACAACAGCATGATAACATGACGCCCGAGGAGATGGAGTTTAACCGGATGCTTGATGGATTTGGTCCTCGTTTTGCTGATTGGTGGGGTACGGGAATACTTCCTGTTGATGCTGATTTGCTTTCCCCTATAGTTCCTGGTTACAGAACACCTCTTAGGCTTCTTCCCACCGGAATGCATCCACGACTCACCAACGATGAGCACGCAAAAATGCTGAAACTGGCCAAAGCTCTTCCTTGTCATTTTGCCTTGGGGAGAAATAGAAATCTTCAAGGTCTGGCATGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTGGTTGCAAAGATTGCCGTCAAGCTTGGTGTCCAGAATACAAACAATGAACTGATGGCTTTGGAGTTGAAGAAATTAACAGGAGGTACCTTACTGCTAAGGAATAAATATTACATCGTAATATATCGAGGGAAGGATTTCGTTCCAGCCAATGTGGCTGCCATTTTATCTGAAAGACAGCAATTGACGAAACAGGTGCAGGATGTTCAGAAGAAGGTGCGATGCAGAGCTGTTGATGTAACTGGCGAAGATGAAACAAATGCACAAGCAGGACTGTTGTCTGAGTTCAATGAGGCTCAAGTATTCCGGGGAAGGGAATTGTCTACTGTAGAATGTGAGAAGATGATGAAAGAGGCTCCTGAAGCGAGTAATGTTAGGATTATGGAAAAAATGGAACGCAAACTAGTTGTTATACATGAAGAGGCTGATACCAAAAAATCAAGAGCAGAAAAGCTATTAACTAAAGTAGATGCATCCATGGTTCCAGCTGGTCCTGATAATAGGAGGGAAACAATCACAGATGAAGAACGTGTAACGTTCCGTATGATTGGTTTAAAAATGAAGGTGTACTTACAACTTGGTACACGCTGTGTTTTTGACAGCGTCATTGAGAATATGCATTTGCATTGGAGGCATCGAGAACTTATTAAATTAATAACAAGAGAAAAAACCGTTGCTTTTGTTGAAGAAATAGCTGGTTTACTGGAATACAAAAGTGGTGGAATACTAGTAGCAATAGATAGACTTCCCAAAGGATTTTCTCTTATTTACTATCGTGGAAAGAGTTATAGGTGGCCAATTGCTCTCCGACCTAGAAACCTTTTAGCAAACGCAAAAAAACATTGCAGCGTTCAACATCCATGCAACAACATGAGAGTGAGGATGAAGGCTTATCATGTTGGTGATTTAGATGATAGTGGAAGAAAGTTATTGGGATGA 4569 0.4233 MRRSKKIPINLEEASVNLLKLKDNNSRISYFLILILIAWFVHKWIFSFSNWFPFALALWASSQYGSYQRKLLEEDLNKKWNRIIVNSSPVTTLEQCEWLNQLLMQIWSNYFNPKLSNRLSAIVEKRLKLRKPRFIERVEVQEFSLGSRPPSLGLQGVRWSTSGDQRVLKMGFDWDTSEMSILMVAKLSVGAARIVINSLHIKGDLLVTPILDGKALLYSFVSTPEVRIGIAFGSGGSQSATELPGVSPWLVKLFTDTLVKTMVEPRRRCFSLPVVDLRKHVVGGMIYVSVISANRLSRSSFKGRQQSGTSNGCLEDNLSDKDLQTFIEVEAEELTRRTGVSPGSTPRWDTTFNMVLHDNTGIVRFNLYECPPNSVKYDYLACCEVKMRHVEDDSTIVWAIGPDSGVIAKHAKLCGEEVEMVVPFEGTNSAELKVRIVVKEWQFSDGSHSLTNLDANPQKSLKGSSNLLSKTGRKLKITVVEAKDLAASDKFGKFDPYVRLQYGKVVMKTNIAPPPPTSTPVWNETFEVDEKNGDEYLIVKCFSEEIFGDENIGSAHVNLEGLVEGSIRDVWIPLEGVSSGELRLKIEAIRVDSKEGSKGPASGTANGWIELVLIEARDLIAADLRGTSDPYVRVTYGNLKKRTKVVHKTLNPRWDQTLEFQDDGSPLILHVKDHNDFLPTSSIGECVVEYQGLPPNQMSDKWIPLQGVKSGEIHIRITRKVPEMQTRQSLDSEHSLTKLHKIPSQIKEMTKKIRSLIEEGNLEELSTSLSELQTLEDTQEGYIAQLETEQMLLISKINELGQEIINSSSLKRSQGFVASASFHGPRVGQGFVASASFHGPRVGHGFVASASFHGPRVGHGFVASASFHGPRVGHGFVASASFHGPRISTILNLKPLTFPSKFKFTLFILKSFSSLSTISNHNNDKPSNAIDRILLRFRNLSHHHDVDEPTQTLPPHQFLHRQWLRSDDAVFPSENQVDQHQQEKVFKKKKKKNEAMAPCLSEEELTRLRTIGMHLKEKISIPKSGLTRPVLHKIHHRWNNNELVKLKFHEFLSQNMNLAHNIVQRRTGGLVIWRSGSVMWVYRGDNYQGPATNAKHNSQSESVVCNQQQHDNMTPEEMEFNRMLDGFGPRFADWWGTGILPVDADLLSPIVPGYRTPLRLLPTGMHPRLTNDEHAKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSLVAKIAVKLGVQNTNNELMALELKKLTGGTLLLRNKYYIVIYRGKDFVPANVAAILSERQQLTKQVQDVQKKVRCRAVDVTGEDETNAQAGLLSEFNEAQVFRGRELSTVECEKMMKEAPEASNVRIMEKMERKLVVIHEEADTKKSRAEKLLTKVDASMVPAGPDNRRETITDEERVTFRMIGLKMKVYLQLGTRCVFDSVIENMHLHWRHRELIKLITREKTVAFVEEIAGLLEYKSGGILVAIDRLPKGFSLIYYRGKSYRWPIALRPRNLLANAKKHCSVQHPCNNMRVRMKAYHVGDLDDSGRKLLG* 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0252 1522 SUPERFAMILY YhbY-like 1000 1090 IPR035920 -
Psa7g0252 1522 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 474 588 IPR035892 -
Psa7g0252 1522 Gene3D - 1381 1480 IPR035920 -
Psa7g0252 1522 Gene3D - 999 1099 IPR035920 -
Psa7g0252 1522 Gene3D - 1168 1262 IPR035920 -
Psa7g0252 1522 ProSiteProfiles C2 domain profile. 590 703 IPR000008 -
Psa7g0252 1522 SMART C2_3c 474 571 IPR000008 -
Psa7g0252 1522 SMART C2_3c 608 702 IPR000008 -
Psa7g0252 1522 SMART C2_3c 285 399 IPR000008 -
Psa7g0252 1522 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 605 718 IPR035892 -
Psa7g0252 1522 PANTHER OS01G0128800 PROTEIN 4 809 - -
Psa7g0252 1522 CDD C2 609 705 - -
Psa7g0252 1522 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 92 273 IPR031468 GO:0008289
Psa7g0252 1522 ProSiteProfiles CRM domain profile. 998 1094 IPR001890 GO:0003723
Psa7g0252 1522 SUPERFAMILY YhbY-like 1381 1479 IPR035920 -
Psa7g0252 1522 SMART CRS1_YhbY_2 1382 1469 IPR001890 GO:0003723
Psa7g0252 1522 SMART CRS1_YhbY_2 1169 1253 IPR001890 GO:0003723
Psa7g0252 1522 SMART CRS1_YhbY_2 1000 1083 IPR001890 GO:0003723
Psa7g0252 1522 ProSiteProfiles CRM domain profile. 1380 1480 IPR001890 GO:0003723
Psa7g0252 1522 Coils Coil 783 803 - -
Psa7g0252 1522 Coils Coil 1262 1282 - -
Psa7g0252 1522 ProSiteProfiles C2 domain profile. 453 572 IPR000008 -
Psa7g0252 1522 SUPERFAMILY YhbY-like 1169 1259 IPR035920 -
Psa7g0252 1522 Pfam CRS1 / YhbY (CRM) domain 1000 1083 IPR001890 GO:0003723
Psa7g0252 1522 Pfam CRS1 / YhbY (CRM) domain 1169 1253 IPR001890 GO:0003723
Psa7g0252 1522 Pfam CRS1 / YhbY (CRM) domain 1383 1469 IPR001890 GO:0003723
Psa7g0252 1522 ProSiteProfiles CRM domain profile. 1167 1264 IPR001890 GO:0003723
Psa7g0252 1522 PANTHER PLANT SYNAPTOTAGMIN 4 809 - -
Psa7g0252 1522 Pfam C2 domain 286 392 IPR000008 -
Psa7g0252 1522 Pfam C2 domain 609 705 IPR000008 -
Psa7g0252 1522 Pfam C2 domain 474 574 IPR000008 -
Psa7g0252 1522 Gene3D C2 domain 458 591 IPR035892 -
Psa7g0252 1522 Gene3D C2 domain 598 720 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0252 Psa-Chr7 16678760 16689861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0252 613 717 Lipid Metabolism Gene Families AT3G61300 27.679 3.06e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0252 - - mtr:MTR_8g104330 1320.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0855 1 57534843 57540726 Psa7g0252 7 16678760 16689861 ECH
Psa7g0252 7 16678760 16689861 Psa7g0252 7 16678760 16689861 ECH