Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0248 ATGGCCGGAAAACAAGTCAGCGGCGAGGTTTTACCGGTGAACCTCGCCGGAATGTCAAAGAATCAGCTTTACGATATCATGTCTCAGATGAAGAATCTGATCGAACAGAACCAGCAACAAGCAAGACAGATCCTCATTCAAAACCCTATGTTGACCAAATCACTTTTTCAGGCACAAATCATGCTTGGAATGGTGCAGTCGCCACAAGCGGTTCCGAAAGTTCAACCAGTGGTTTCGCAGAACAGTCAGCAGACAATACAGCCAACACAACAGCCAAGCGTTCAGCCTGCTCCATTATTGCCTGGGCAGGGTGGCGTACAGGATCAAGCAGGTGTGTCTCACACTCATATTCCTCCAAGGAAACACCAAAACCAGCCTTCAGTTCCAGTCTCGTATGCTACTATTCCTGCAACGAGTCATCAGTCTCAGCCCATGGCTGCACATTCTATGCAGATGCCACAACAGCCCAAAGGACACCCGACTCCGCAAGTGGCTCCGGCAGCTGTTCCACAATCATCACAACTTCCAAAGATACCTCCACCCTCTGTTCATTCATCTTCACAGCCACATCATCCAACACAACTGCCATCTGCCTCTAGTCAGCCACCATTGCAGACACCTGGATTTTCACATATGCCTATGCAACCACCACTGCCACCACAGCTCAGACCACCTTCAGTGCAAACCTTCCACCCTCAGTATCCCCCACAAATGGGTGCAAACTTAGGTTTTCAACATGCTGGTGGTGCTTCTCACAATCATCCACAACCCATGTATCATCCTGGTACAAAACCTCCTTCTAATGTTGGATCTGCATTCCCACTGGGGCAGACACCACTACAAAATCAACAATCATCTCAGTCACCCTATCAGGTTGGAAATATGCCTTTCGGGTCTGATTTTGGCAGTCAAGCTGGAAATGCAATGCAAATTGATAGAGGGTCTTCTTGGATGCCCGGTCCTTCAGAAAACCTAGCACAGCATTCTGGTCCTCCGGGACCACCGTCTATGGTTTCTGGTCAGATGGGTGCTGCTAATCAGTCTCTTCGGCCTCCTGCGTTGACCCCAGATATGGAGAAGGCATTGCTTCAGCAGGTCATGAGTCTCACACCGGAGCAGATAAATCTTCTTCCCCCGGAACAAAGAAATCAAGTGTTGCAACTGCAGCTGATGTTGCGTAAATGA 1185 0.4911 MAGKQVSGEVLPVNLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKSLFQAQIMLGMVQSPQAVPKVQPVVSQNSQQTIQPTQQPSVQPAPLLPGQGGVQDQAGVSHTHIPPRKHQNQPSVPVSYATIPATSHQSQPMAAHSMQMPQQPKGHPTPQVAPAAVPQSSQLPKIPPPSVHSSSQPHHPTQLPSASSQPPLQTPGFSHMPMQPPLPPQLRPPSVQTFHPQYPPQMGANLGFQHAGGASHNHPQPMYHPGTKPPSNVGSAFPLGQTPLQNQQSSQSPYQVGNMPFGSDFGSQAGNAMQIDRGSSWMPGPSENLAQHSGPPGPPSMVSGQMGAANQSLRPPALTPDMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQLMLRK* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0248 394 MobiDBLite consensus disorder prediction 137 204 - -
Psa7g0248 394 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 394 - -
Psa7g0248 394 MobiDBLite consensus disorder prediction 187 204 - -
Psa7g0248 394 MobiDBLite consensus disorder prediction 324 347 - -
Psa7g0248 394 Pfam Hinge domain of cleavage stimulation factor subunit 2 13 67 IPR025742 -
Psa7g0248 394 Pfam Transcription termination and cleavage factor C-terminal 360 389 IPR026896 GO:0031124
Psa7g0248 394 Gene3D - 355 394 IPR038192 -
Psa7g0248 394 MobiDBLite consensus disorder prediction 137 158 - -
Psa7g0248 394 Gene3D - 2 72 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0248 - - lja:Lj4g3v3099310.1 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0248 7 16621760 16628610 Psa7g0248 7 16621760 16628610 ECH