Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0226 ATGAAGGCACAGTCTGTGTCATCACTTGCATTGCCATCTCCACTTTCAAAAAATGCCAAAGATGAGGATCAGCAACCAACTGAGGCAACCGGTGTTGGTAGAAACTGGGTGCAAAGTATGTTCAGCCGAAATACAACATCTAGATCCAGCTCATTTAGTCGTGTTCGTAGATGGACATCTGACGGAGGCAATTCAGTCACCAGTGAGAATGGGACTCCTCGCAAACAAGATCTATCTTCTGGGGGGCAGAAGAAACTTCAAACTAATGTCCGCATGCTTAGGGGTCATAATGGTGCCGTTACTGCTCTTCACTGTGTTACAAAGAGAGAAGTGTGGGATTTGGTGGGTGACCGTGAAGATGCTGGTTTCTTTATTAGTGGAAGTACAGACTGTTCTGTTAAGATATGGGACCCAAGTCTTCGCGGCTCTGAACTCAGGGCAACTTTAAAAGGGCATACAAGGACTGTCCGAGCCATAAGTTCAGATAGGGGGAAAGTGGTGTCAGGATCTGATGATAAGTCTGTTTTGGTGTGGGATAAGCAGACAACTCAACTTTTAGAAGAGCTTAAAGGCCATGATGGACCGGTCAGCTGTGTACGCACGCTCTCAGGTGAGCGTGTGCTAACTGCATCTCACGATGGCACTGTGAAGATGTGGGATGTAAGAACTGATAGATGTGTTGCAACTGTTGGTCGTTGCTCTAGTGCTGTTTTATGTATGGAATATGATGACAATGTGGGAATCTTGGCTGCGGCTGGAAGAGATGTGGTTGCCAACATGTGGGACATTCGTGCTAGTAGGCAGATGCATAAACTTTCAGGACATACACAATGGATAAGGTCATTAAGAATGGTTGGTGACACTGTTATTACTGGTAGTGATGACTGGACAGCAAGAATATGGTCTGTTTCACGAGGAACATGTGATGCTGTCCTAGCATGCCATGCAGGGCCAGTATTATGTGTTGAATATTCTTCGTTAGATAGAGGAATAATAACGGGGTCAACCGATGGCCTGATGCGGTTTTGGGAAAATGATGATGGAGGTATACGGTGTGCAAAAAATGTAACAATTCACAACGCTGCCATATTATCTATCAATGCTGGGGAGCACTGGTTAGGTATTGGAGCGGCTGATAATTCTCTTTCTCTCTTTCATCGGCCCCAAGAGGAACTTGGTTAG 1182 0.4552 MKAQSVSSLALPSPLSKNAKDEDQQPTEATGVGRNWVQSMFSRNTTSRSSSFSRVRRWTSDGGNSVTSENGTPRKQDLSSGGQKKLQTNVRMLRGHNGAVTALHCVTKREVWDLVGDREDAGFFISGSTDCSVKIWDPSLRGSELRATLKGHTRTVRAISSDRGKVVSGSDDKSVLVWDKQTTQLLEELKGHDGPVSCVRTLSGERVLTASHDGTVKMWDVRTDRCVATVGRCSSAVLCMEYDDNVGILAAAGRDVVANMWDIRASRQMHKLSGHTQWIRSLRMVGDTVITGSDDWTARIWSVSRGTCDAVLACHAGPVLCVEYSSLDRGIITGSTDGLMRFWENDDGGIRCAKNVTIHNAAILSINAGEHWLGIGAADNSLSLFHRPQEELG* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0226 393 CDD WD40 89 385 - -
Psa7g0226 393 PANTHER - 14 387 - -
Psa7g0226 393 MobiDBLite consensus disorder prediction 1 84 - -
Psa7g0226 393 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 189 223 - -
Psa7g0226 393 MobiDBLite consensus disorder prediction 28 84 - -
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 149 179 - -
Psa7g0226 393 SUPERFAMILY WD40 repeat-like 88 387 IPR036322 GO:0005515
Psa7g0226 393 Pfam WD domain, G-beta repeat 307 343 IPR001680 GO:0005515
Psa7g0226 393 Pfam WD domain, G-beta repeat 88 137 IPR001680 GO:0005515
Psa7g0226 393 Pfam WD domain, G-beta repeat 147 179 IPR001680 GO:0005515
Psa7g0226 393 Pfam WD domain, G-beta repeat 184 220 IPR001680 GO:0005515
Psa7g0226 393 Pfam WD domain, G-beta repeat 268 302 IPR001680 GO:0005515
Psa7g0226 393 Gene3D - 49 267 IPR015943 GO:0005515
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 312 344 - -
Psa7g0226 393 Gene3D - 268 392 IPR015943 GO:0005515
Psa7g0226 393 PANTHER SUPERNUMERARY LIMBS, ISOFORM B 14 387 - -
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 311 IPR001680 GO:0005515
Psa7g0226 393 ProSitePatterns Trp-Asp (WD) repeats signature. 207 221 IPR019775 -
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats profile. 189 229 IPR001680 GO:0005515
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 188 IPR001680 GO:0005515
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats profile. 119 137 IPR001680 GO:0005515
Psa7g0226 393 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 344 IPR001680 GO:0005515
Psa7g0226 393 PRINTS G protein beta WD-40 repeat signature 166 180 IPR020472 -
Psa7g0226 393 PRINTS G protein beta WD-40 repeat signature 207 221 IPR020472 -
Psa7g0226 393 PRINTS G protein beta WD-40 repeat signature 289 303 IPR020472 -
Psa7g0226 393 SMART WD40_4 265 302 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 86 137 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 142 179 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 223 262 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 349 386 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 305 344 IPR001680 GO:0005515
Psa7g0226 393 SMART WD40_4 182 220 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0226 89 356 Acyl Lipid Metabolism Gene Families AT3G18860 25.263 1.56e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0226 - - gmx:100818305 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0226 7 15591060 15600903 Psa7g0226 7 15591060 15600903 ECH