Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0197 ATGGATGATGCTGATGATATATTCATGCAGTCATGGACTGGTACTATTATTGGCCCCCCTGGTACTGTTCATGAAGGTCGTATCTACCAATTGAAGTTGTTCTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGCATTAATCAAGAATCTGGAGCGGTTGAGCCAAATTTGTTTCCCATGCTTGCTAATTGGAAAAGAGAGTCTACAATGGAAGATATTTTACTGCAATTGAAGAAAGAAATGATGTCTCCACAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGCAATGAAGATGGAAGGATTGACCAAAAGGGGCTGGTGCTGAGATGTTGTATTGTGTAA 375 0.4107 MDDADDIFMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCINQESGAVEPNLFPMLANWKRESTMEDILLQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0197 124 SMART ubc_7 1 123 - -
Psa7g0197 124 Pfam Ubiquitin-conjugating enzyme 9 101 IPR000608 -
Psa7g0197 124 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 1 109 - -
Psa7g0197 124 SUPERFAMILY UBC-like 3 107 IPR016135 -
Psa7g0197 124 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 124 IPR000608 -
Psa7g0197 124 Gene3D Ubiquitin Conjugating Enzyme 1 109 IPR016135 -
Psa7g0197 124 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0197 Psa-Chr7 14019104 14024603 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0197 K10704 - gmx:100820440 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0197 7 14019104 14024603 Psa7g0197 7 14019104 14024603 ECH