Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0134 ATGGGGAGCCCTGGGTTGAGCAACCGCAATAGCAGCCTGCAGCAGCGGTTAGGGATAACAGGACCCATCTCAGTGAGTGGACCGACTGAATATGATGTCGCCAAGTCCACTGAACTCGACAAGTACTTGCAAGACGCCGGCTTGTATGAGAGTCGGGAGGAAGCAATTTGCAGGGAGGGAGTGCTAGGCAGACTAGACCAGATTGTGAAGATTTGGGTTAAAACCATTACGCGTGCAAAGGGATTTAACGAACAATTCGTGCGGGAAGCAAATGCCAAGATTTTTACTTTTGGCTCCTATCGCCTAGGGGTGCATGGCCCTGGAGCAGATATTGATGTTCTTTGTGTGGGACCTAGACATACAACCAGAGATGAAGATTTCTTTGGTGAGCTACATAAAATGCTATCTAAGATGCCTGAAGTGACAGAGTTGCGCCCAGTGCCTGGTGCTCGTGTCCCAGTGATGGGTTTCAAGTTCAACGATGTCTCTATGGATCTCCTTTATGCAAATTTATCTTTGTGGGTTATTCCTGAAGACTTGGATTTATCACAGGAATCAATATTACAAAATGCAGACGAAAAATCTGTTCTCAGTCTTAATGGCTGTAGAGTGACTGATCAAATCTTGAATTTGGTTCCAAATGTTCAGAACTATCGTACGACATTGAGATGCATAAAGTTATGGGCTAAGCGTCGTGGCATTTATTCTAATGTTATAGGTTTTCTTGGTGGTATAAACTGGGCATTGCTTGTTGCCCGAATATGCCAGCTATATCCGAATGCGCTGCCGAATATATTGGTGTCTCGATTCTTTAGGGTATATACACAATGGCAATGGCCAAACCCAGTAATGCTTTGTGAAATTAGAGAAGACTGTCTTGGACTTAGAATTTGGGATCCTAGAAAACATCCGAGTGATAAGAACCATCGAATGCCAATAATTACTCCCGCTTATCCTTGCATGAATTCTAGCTACAATGTGTCGTCAAGTACATTGCGTATCATGACGGAGGAGTTTAAAAGGGGAGGTGAAATTTGTGAGGATATGGAGGCTAAGAAAAAGGCTGATTGGGATACTCTTTTTGAGTCCTTTCCATTTTTTGAAGCTTATAAGAATTATTTGCAGATAGACATTTCAGCAGAGAATCCTGATGATCTTAGAAACTGGAAAGGCTGGGTTATGTCCCGCTTGCGCCAGTTAACATTGAAGATTGAGAGGGACACTGATGGCATGCTTCAGTGTCATCCACATCCTCAGGATTTTTCAGACAAATCTAGACCTCTGCACTGTTCTTACTTCATGGGTCTGCAACTTAAGCAAGGAGTTCCTGCCAAAGAAGGAGAACCATTTGATATAAGACTAACCATTGACGAATTTAAGCATGTTGTCAATAAATACGTTGGATGGAAACATGGAATGAATATATTTGTCACCCATGTGAAACGCCGCGATATACCTGTCTTTGTATTTCCTGGTGGTGTTCGGCCTAACTGCCCATCCAATGTAACCAGGGTGAGTAATCGAAGTTCAGAGCTTGGGGTTTCTGGCCATGGTCAAGCAGAAAAATCTCAAGAAGGTAAAGTGGCCGTGTTAGGAGATACCAATGATAAGAAGAGAAAGCAAGCAGAAGATAGTGTGGATGCGTTGAGAAATTCCAAGCCCTTTTCAGGGGAGTACTCTTCTGGGAACAGAGACACCGGTAAGGAGAAAAGCATCTCAGAAATTAACCCTCTACTTACTGCTACTGATATATCTAGTTCTAAAGAAGCAGAAGAGCTCGGTATCGAAAATATTACGCGTGGTCCATATGATGCACATCAAGCCTTTTCAGAAGAACCTGATGAGCTTGAAAATGATATTGAGTACAGAAATAAAGACAGAGATTTTGGCAGGAACATGAAAAACATCAAATTGAACTCTCCATGCTCAGAGTCTATAGTGGCAGCAGAACCAGTTTTTTCTCAAAAAGAAAATAATAGTTCAACTCATATACACTCCAATGAGAGCTTAGAGGAGCTTGAGCCTGCTGAGCTAACACCTCCATTGTCAAGTGGGAATCATGCACCGGTGCCACAGCGGAAGCCAGTATTTAGGTTCACCACATTGGGCAAATCTGCTGACAAAGGTTCCTAA 2133 0.4294 MGSPGLSNRNSSLQQRLGITGPISVSGPTEYDVAKSTELDKYLQDAGLYESREEAICREGVLGRLDQIVKIWVKTITRAKGFNEQFVREANAKIFTFGSYRLGVHGPGADIDVLCVGPRHTTRDEDFFGELHKMLSKMPEVTELRPVPGARVPVMGFKFNDVSMDLLYANLSLWVIPEDLDLSQESILQNADEKSVLSLNGCRVTDQILNLVPNVQNYRTTLRCIKLWAKRRGIYSNVIGFLGGINWALLVARICQLYPNALPNILVSRFFRVYTQWQWPNPVMLCEIREDCLGLRIWDPRKHPSDKNHRMPIITPAYPCMNSSYNVSSSTLRIMTEEFKRGGEICEDMEAKKKADWDTLFESFPFFEAYKNYLQIDISAENPDDLRNWKGWVMSRLRQLTLKIERDTDGMLQCHPHPQDFSDKSRPLHCSYFMGLQLKQGVPAKEGEPFDIRLTIDEFKHVVNKYVGWKHGMNIFVTHVKRRDIPVFVFPGGVRPNCPSNVTRVSNRSSELGVSGHGQAEKSQEGKVAVLGDTNDKKRKQAEDSVDALRNSKPFSGEYSSGNRDTGKEKSISEINPLLTATDISSSKEAEELGIENITRGPYDAHQAFSEEPDELENDIEYRNKDRDFGRNMKNIKLNSPCSESIVAAEPVFSQKENNSSTHIHSNESLEELEPAELTPPLSSGNHAPVPQRKPVFRFTTLGKSADKGS* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0134 710 Gene3D - 18 361 - -
Psa7g0134 710 SUPERFAMILY PAP/OAS1 substrate-binding domain 213 362 - -
Psa7g0134 710 Pfam Poly(A) polymerase central domain 18 362 IPR007012 GO:0004652|GO:0043631
Psa7g0134 710 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 364 490 IPR011068 GO:0003723|GO:0016779|GO:0031123
Psa7g0134 710 Gene3D Poly(A) polymerase predicted RNA binding domain 365 480 - -
Psa7g0134 710 PANTHER POLY A POLYMERASE 1 673 - -
Psa7g0134 710 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 673 - -
Psa7g0134 710 SUPERFAMILY Nucleotidyltransferase 18 208 IPR043519 -
Psa7g0134 710 Pfam Nucleotidyltransferase domain 88 144 IPR002934 GO:0016779
Psa7g0134 710 Pfam Poly(A) polymerase predicted RNA binding domain 366 425 IPR007010 GO:0003723|GO:0043631
Psa7g0134 710 Pfam Poly(A) polymerase predicted RNA binding domain 428 496 IPR007010 GO:0003723|GO:0043631
Psa7g0134 710 MobiDBLite consensus disorder prediction 507 574 - -
Psa7g0134 710 Gene3D Beta Polymerase, domain 2 50 206 IPR043519 -
Psa7g0134 710 CDD NT_PAP_TUTase 58 212 - -
Psa7g0134 710 MobiDBLite consensus disorder prediction 653 710 - -
Psa7g0134 710 MobiDBLite consensus disorder prediction 531 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0134 Psa-Chr7 9289428 9293324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0134 K14376 - gmx:100816915 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0134 7 9289428 9293324 Psa7g0134 7 9289428 9293324 ECH