Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0030 ATGTCGATTGTCACCGGAGATCGGTATTTGGAGAAACTCGTAAAGTTTGTCGAGGAAGAGGCCGGTCATCTCATTGAAGGAACCTTGGTCTTGAAGCTAAATCCCGCAGGGCTTCACTACGTTCAATCCAGGCTCGAGGCGTTGCATGAGGTAGAGAGTCTACTCGTCGGAGCCCCGGTCGACTACCTTCGAGCCTATGTCTCCGACCTCGGCGATCACCGCGCGCTTGAGCAACTCCGGAGGATCCTTCGCCTCCTCACCTCGCTTAAGGTGGTTTCGGTGTTGCCACCTCCCGTTAGAGATCCCACGCCCTTGTCGTTTTTGCCGTTTGGGCGGTTGAAGGTTCTTGAACTCCGGGGATGCGACTTGTCAACTTCTGCCGCCAAAGGCTTGCTCGAGCTCAGGCATACTCTCGAGAAGATTATTTGTCATAATTCTACCGATGCTCTGCGGCATGTGTTTGCTAGTAGGATAACAGAGATAAAGGATTCTCCTCAATGGAACCGGTTATCGTTTGTGTCTTGTGCATGTAATGGTTTGGTTCTCATGGACGAGTCTTTGCAGCTTCTTCCTGCAGTGGAAACACTTGATCTTAGCAGGAACAAGTTTGCAAAGGTTGATAATCTGCATCATTGTACCAAATTGAAGCATTTGGACCTTGGTTTCAATCACCTCAGAACATTTGCTCCCTTCACCCAGGTCTCCTGTCATATTGTTAAACTTGTTTTAAGGAACAATGCTCTAACTACTTTGCGAGGAATTGAGAATTTGAAGTCACTCGAAGGACTTGATGTTTCCTACAATATTATTTCAAATTTTTCAGAGCTTGAGTTTCTTGTGGGCCTTTTGTATCTAAAAAGCTTGTGGTTGGAAGGAAATCCTTTATGTTGTGCCCGATGGTATAGGGCACATGTATTCAGTTTCTTCGCCTACCCAGAAAGGTTAAAGTTAGACGAGAAGGAAATTAATGCTACAGATTTTTGGACGAGACAAATAATTATTGCCAGTATGCATAAGCAACCTGCCAGCTTTGGGATTTATGTACCTGCCAAGGATGAGGCTATAGTGGAAGGTGGAAATAATAGAAGGAGAAAGGTCTATCGTGTTGCCAGCATTGAGAGTGAAGGAGAGATCACTAGTATATGTTCTGATCCGGAGTCTCAATCATGCGTGAATGAAACTCAAAATAACGAGGATCCTAATTTATTTGACGATGAAGCTGAAATAGCAGATTTAATGAATAAAGTTGAACACATGAAGAAAGAACGTTCTATTCTATGGTTGCGGGAATTTAGAGACTGGATGAATATTTCTTCTGAGAAATCGGCAGAAATTGAGAAAAAGGGAAGAGGTAAATCACACCATCAGAAAGATAATTTCTTCAGAAACAGTGCAAATCAGGAGCAACATGGTGAAGTCTCGAGATATGCATCAGACTCTATTCTAGCTTCAGGTGATGAAAGTAGCTTGAATATTTTAGAATATGACAGTTCTTTTGCAGATATGTCTGCTTGGTTTCATAGACAGCAATACTTTGACTACAGAGGATCTCTTGGTAATGCTAGTGGGGCCTCTCTTTCTGACTTAGGGGGAGTGGATTTGGAACGTTTCAAAGCTTTTTTTTCACTTCAGGGAATTAATACACCCCTCTCACAATCTAAAAATTCTCATTCTGACACCATTGCCACCCAAGGAGCAGATTTAAGGACTGAAAATGTCAACTTATCTCCATTGACCACTATTGGTGATGTAAATGGGTCTCGGTCATCATCTATATGTCCCACATCTCCTCCTCACTTTCAAGAAGACCTTCTTCATCGCCGCCATAACTTGGTGGAGGAAATTTTGCAACTGTCGGCTGATTCCTTTTCAGTGGCGACTTCTGATAGTAACACAAGCTGTAGTGTGGTTGATTGCACCGAATTTGAACCACCAGTTCCTGTAGTTGATAGTCCCCCATGCAAAAATAATGTGGATGGGGGTGTTGATGGACTTACATCTCCAAATCAACACGAGGAAGATTATTGCAGCCCTAGACAAGGAATTATTCACATAGGGAAAAATGACATTTGTTCAGTTGGTTCATCCAGTGACCAAACTTCTAAGCAGTGTTCAATGGATTTTGCTGGCGACGGCAATGGTGAGAGTACACTTTCTGCTAGCCAACAAACTGATTTGTTCGAGAAAAGAAAAATCAGAAAAAAAGCCAAGAAGAGAGTGATTTCAATATTTGAAGATAATGTAGACATCAATGCACGTGGTCACGAACAAGAGCAGATGCACCAAGGACAGGTTTCTGGAAATTTAAGGGAAGAATCAGGTGTTGATGATTTCACTGAATTTAGTTGGCGTACTTGCTCTACCCTAGAGAATGATGAGCTTATCATCATGTATTTCAATACAAATATTGCTGATTCTGAAGCCAAGGAAGTCTGTAGTCATTGCATCCGTTGTAATTGCATACTTCAAATGGAGACAAACTATAAAGAAAGGGAAGTTGCAGTGTTGCTGACCAACCATAAGAAGCTCTATGTGCTGCTAATCAATGTTGCTTCTGATGGATCAGGGGCACTATTGAAAGTCTTGAGTTGCCACAAAACGGAAGAAGTTCGGGAGGTGCTTGTTGGAATGGGCCTTCAGGTGTTAAGGGTAAATTTTGAGGGTGGTAAAACGTACCTGTTTGTAACAAGAAGCATTGAATTGTCAAGAGAGTTACTATGTACCGTACATGTGTTTGATTCATGTGATGGAAATGCTAGATGCTCATTAAGAAGTTTGGAGCAGGTCCAGGTTGAGTTGTTTAGCCATCAAATATGTGGTGGTTCAAATTTCAGCATATACCAGTATGCAATGGTGCTTATCTGTTGTAAGAATGGCAATCAAGAATCATGGCTGTCAAGATCGCTGTTTGTGATAGGAGGTTATGTACTTTTATGCATTGAAGATATCAAGCAACTGTATTCATTTTCATCAGATGCGGCTGTGTCTCCATATTACAGAATCGATTCATGTTGCTCCATTGCTGACATTACTGAGATGGTGACTGGGGTTGGTGATAGCTACTGTGTTACTTTAAGTCTGAAATGTTCTTTGACAGACTTTTATCCCTCTACCCGAATGAACCTTGTAACGGTCAGTCATGGAGACACGGCCCCAGGCTCTCTGAAATTAAAGCTTCGGTGGTTCTCCAAAGATAACCTTTTGCAGTTTGTGTCTTTGGTGAAGGCATTCCATGCTGAAAAAACGGGGTCGCCTTTGGTAGTGAGATGTACATCGTAA 3279 0.4233 MSIVTGDRYLEKLVKFVEEEAGHLIEGTLVLKLNPAGLHYVQSRLEALHEVESLLVGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPPPVRDPTPLSFLPFGRLKVLELRGCDLSTSAAKGLLELRHTLEKIICHNSTDALRHVFASRITEIKDSPQWNRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVDNLHHCTKLKHLDLGFNHLRTFAPFTQVSCHIVKLVLRNNALTTLRGIENLKSLEGLDVSYNIISNFSELEFLVGLLYLKSLWLEGNPLCCARWYRAHVFSFFAYPERLKLDEKEINATDFWTRQIIIASMHKQPASFGIYVPAKDEAIVEGGNNRRRKVYRVASIESEGEITSICSDPESQSCVNETQNNEDPNLFDDEAEIADLMNKVEHMKKERSILWLREFRDWMNISSEKSAEIEKKGRGKSHHQKDNFFRNSANQEQHGEVSRYASDSILASGDESSLNILEYDSSFADMSAWFHRQQYFDYRGSLGNASGASLSDLGGVDLERFKAFFSLQGINTPLSQSKNSHSDTIATQGADLRTENVNLSPLTTIGDVNGSRSSSICPTSPPHFQEDLLHRRHNLVEEILQLSADSFSVATSDSNTSCSVVDCTEFEPPVPVVDSPPCKNNVDGGVDGLTSPNQHEEDYCSPRQGIIHIGKNDICSVGSSSDQTSKQCSMDFAGDGNGESTLSASQQTDLFEKRKIRKKAKKRVISIFEDNVDINARGHEQEQMHQGQVSGNLREESGVDDFTEFSWRTCSTLENDELIIMYFNTNIADSEAKEVCSHCIRCNCILQMETNYKEREVAVLLTNHKKLYVLLINVASDGSGALLKVLSCHKTEEVREVLVGMGLQVLRVNFEGGKTYLFVTRSIELSRELLCTVHVFDSCDGNARCSLRSLEQVQVELFSHQICGGSNFSIYQYAMVLICCKNGNQESWLSRSLFVIGGYVLLCIEDIKQLYSFSSDAAVSPYYRIDSCCSIADITEMVTGVGDSYCVTLSLKCSLTDFYPSTRMNLVTVSHGDTAPGSLKLKLRWFSKDNLLQFVSLVKAFHAEKTGSPLVVRCTS* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0030 1092 MobiDBLite consensus disorder prediction 442 473 - -
Psa7g0030 1092 SMART LRR_sd22_2 257 278 - -
Psa7g0030 1092 SMART LRR_sd22_2 190 211 - -
Psa7g0030 1092 SMART LRR_sd22_2 212 233 - -
Psa7g0030 1092 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 2 1088 - -
Psa7g0030 1092 Gene3D Ribonuclease Inhibitor 234 326 IPR032675 -
Psa7g0030 1092 ProSiteProfiles Leucine-rich repeat profile. 259 280 IPR001611 GO:0005515
Psa7g0030 1092 SUPERFAMILY L domain-like 176 323 - -
Psa7g0030 1092 Coils Coil 402 422 - -
Psa7g0030 1092 PANTHER NISCHARIN RELATED 2 1088 - -
Psa7g0030 1092 Gene3D Ribonuclease Inhibitor 72 233 IPR032675 -
Psa7g0030 1092 MobiDBLite consensus disorder prediction 442 461 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0030 - - gmx:100800812 1631.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0030 7 857995 866670 Psa7g0030 7 857995 866670 ECH