Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5337 ATGGCGACTGCAACGGAGGCGAGGCTAGATCAACTCCCTTACGCTCTACTCGCCACCATAATGACCAAACTCGACGTCGCCTCCATCTGTTCATTATCCTCCACTTGCTCCACCTTCCGCTCATGCGCCAAACACATCCTCTCCTTCCTCCCCAATTTCCATCTCATCGATATTGCGCCTTCTGGTGACTTGCTCACGCCGTTGCTCCCGCCTAATCCTTACATGAAGAGCCTCAAAGTTGATTGTGACCGTCTCGATGATTCCGCGATTTCTTATTTGGTGAAACCGTCGCTGCATGAGCTTTCTTTGTTCAATTGTTCTGATTTTAGTGGGAAGCTTCTCTCTGAGATCGGTACTCAATGCAAGGACTTAAGGTCTCTTTACTTGGGTTCAGTTGCAGAAAAAAGAGGGAGGGCAATTCATATATCTGATCTGGAGGAGTTACTCACTGGTTGCTCCCAGTTGGAAGTTTTGATTCTGATGTTTGACGTCTCTCTCTTTCTACGTCAAAACTTAGCTCGAGTTTGGGCTTCTGCCTCTGAGAAACTTACTTCTCTTGAGATTGGATACATTTCTTCAGTAACAGTGATTGAACTGTTCAGCTCAAACATGGGATCTCATCAGCCACCTAATCCTATTCAACCATCAATACTTCCAGGAATTCTAAAATTGTGTCTTTCGGTGAACTATATAACGGATGCTATGGTTGCCACAATATCCAAAGGTCTCATCTTTTTGACTCATTTGGATCTTCGTGATGCACCATTTGTTGAACCAAGAATTACATTTGATCTAACCAACGCTGGTCTTCAGCAAATTAATCAACTTGGGAGATTGAAACATCTTTCATTGATCCGAAGCCAAGAGTTCATAATTTGTTACTTTCGAAGAGTAAACGATCTCGGATTACTTTTAATGGCTGACAAGTGTGCAAACATGGAGAGTATATGTCTTGGTGGTTTTTGTCGTGTCACAGACACCGGAATCAAAACTCTCTTGCATTCTTGCTCTCGTCTATATAAACTTAAGGTCACTCACGGGACTCAATTATCCGATCTAGTCTTTCATGATATCTCTGCAACATCCCTTACTTTAACACATGTGAGCTTAAGATGGTGCAAGTTATTAACCAATCATGCAGTTCTTAGTTTGACATCAAACAGAGAACTTAAAGTTCTCGACTTGAGAGATTGCAGGAGCCTTGGGGATGAAGCTCTCCGAGCCATTGGCGTGCTTCTGAAACTGAAAATTTTACTAGTAGATGGCTCTGATATAACTGATGCTGGACTTTCATACTTAAGGCCAACTGTTATAAATTCACTATATGCGTTGTCTCTTCGAGGGTGCAAGAGACTCACCGATAAATGCATAACAATTTTATTTGATGGTTGTGGCAAGCTGGAATTAAGAGACTTGGATCTATCCAATCTTCCTAACCTCTCAGATAATGGAGTTCTGCAGCTGGCAAAAAGTCGAATTCCTTTTTTGGATCTTCGAATGCGACAATGCCCTTTAATTGGTGATACCTCGATCATGGCATTAGCTTCAATGATGACAGATGATGCTGGATGGCATGAAAGTGGTTTGCGGTTGTTGGATTTATATAACTGCGGTGGCATTACGCCACTTGCTTTTCGTTGGTTAAAGAAACCATATTTTCCAAGGCTTAAATGGTTAGGAGTGACCGGAAGTGTTAATAGAGACATGGTAGATGCTTTAGCTAGAAGTAGACCTTTCTTGTACGTAGCATGCGATGGCGAGGAGCTCGGGCCTGACCCGTGTGATATGTCTGATGGTTTATATACACATGATTATGATGAGGTGGATGAATTTGAGCAGTGGCTTCTTGAAGGTGATATTAATACAGATGATGAAGAAATGGACGATGCTGAAAATGTTGAAGAGTTGATTATGTAG 1917 0.4215 MATATEARLDQLPYALLATIMTKLDVASICSLSSTCSTFRSCAKHILSFLPNFHLIDIAPSGDLLTPLLPPNPYMKSLKVDCDRLDDSAISYLVKPSLHELSLFNCSDFSGKLLSEIGTQCKDLRSLYLGSVAEKRGRAIHISDLEELLTGCSQLEVLILMFDVSLFLRQNLARVWASASEKLTSLEIGYISSVTVIELFSSNMGSHQPPNPIQPSILPGILKLCLSVNYITDAMVATISKGLIFLTHLDLRDAPFVEPRITFDLTNAGLQQINQLGRLKHLSLIRSQEFIICYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGIKTLLHSCSRLYKLKVTHGTQLSDLVFHDISATSLTLTHVSLRWCKLLTNHAVLSLTSNRELKVLDLRDCRSLGDEALRAIGVLLKLKILLVDGSDITDAGLSYLRPTVINSLYALSLRGCKRLTDKCITILFDGCGKLELRDLDLSNLPNLSDNGVLQLAKSRIPFLDLRMRQCPLIGDTSIMALASMMTDDAGWHESGLRLLDLYNCGGITPLAFRWLKKPYFPRLKWLGVTGSVNRDMVDALARSRPFLYVACDGEELGPDPCDMSDGLYTHDYDEVDEFEQWLLEGDINTDDEEMDDAENVEELIM* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5337 638 Gene3D Ribonuclease Inhibitor 414 588 IPR032675 -
Psa6g5337 638 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 12 563 - -
Psa6g5337 638 Pfam F-box domain 9 46 IPR001810 GO:0005515
Psa6g5337 638 Pfam Leucine Rich repeat 386 409 IPR001611 GO:0005515
Psa6g5337 638 PANTHER UNCHARACTERIZED 12 563 - -
Psa6g5337 638 Gene3D Ribonuclease Inhibitor 61 413 IPR032675 -
Psa6g5337 638 SMART LRR_CC_2 526 551 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 493 517 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 95 120 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 466 491 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 362 387 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 388 412 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 438 463 IPR006553 -
Psa6g5337 638 SMART LRR_CC_2 310 335 IPR006553 -
Psa6g5337 638 SUPERFAMILY RNI-like 297 563 - -
Psa6g5337 638 SUPERFAMILY F-box domain 7 45 IPR036047 GO:0005515
Psa6g5337 638 SUPERFAMILY RNI-like 49 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5337 - - pvu:PHAVU_007G016400g 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5337 6 467449383 467453158 Psa6g5337 6 467449383 467453158 ECH