Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5327 ATGGGGTGTGTTGCTTCAAGACTAGAGGAAGAAGAAGAAGTGGTAGCTATTTGTAGAGAGAGAAAACGTCAGCTGAAGTTAGCTGTAGAGAGAAGATATGCACTTGCTGAGGCTCATTGTAAGTATTTTCACTCTTTGAATGCAGTAGCTGCAGCTATTAAGCTTTTTGTTGCAAGACATTCTTCACCTTCTTCACCTTTCCTTATAACTTTCCCTCCAAAGGAGGGTTTTGATCCTTCTCCTTCACATTCATCAAGTGAAAATGTCATAAATAACCCTATGTTCCTTCAGCAAACACCTTCAGAAACCAAACATGAAACTGTTGCTTGTGACTCATGCATTGCTTCAAGTTCAACAACCTCAGAGTCTTCTGATGAAGAGGGAGAGGGAGAGGGAGAAGAAGGAGAAGGTGGTAGAGAAGAGGTAAATGAACAGCCATGTGAGTATTACTACATGCAAATGCCTATGCATATGTCTATGCCTGTGCCACCTTCAATGCCATCTCCACATAGAGATTTTGGCTGGGATTTCTTTTACCCTTTTGACAGTATGAGGCCAGAGGTTATGAATGGCTATCATCGGAACTCGGACGATGATTTGAGAGCGGTGAGGGAAGAAGAAGGGATTCCGGAGTTAGAGGAAGAAGTGGAAAGGGAAGAAGAGATTGAGCATAAGGTGGTGGTGAATGTTGAGGAGAAGAGTAATGAAGGTGGAGGGAGAGTTATGAGTGGCGTTGAGACGGCGGATACGAAGACGGTGAATGTGGCTAGTGAAAATGTTGGGGAACAAAAGGGGCTTGCAGTTCTTGATACACCTGCTGAAGGGAGAGAGTTGCTTGAAGCTTTGAAAGATATTGAGGATTATTTCATTAGGGCTTATGAGTCTGGTAAAGGTGTGACAAAGATGCTTGAGGCTAATAGGATTCCCCTTCATTCTAGTTTGGAGGAAATCAAAGAAAGTTCGACGAAACTCATTAATGCGATAACTTGGAAGTCCATGTCCTCTAGGCAATCGTCATGCAAGAGTTTGGTGGTTCAGAATATGAAAGATTCTTCAAGTTGGGTGGAATATAAGAATGATCTATTTGATGATTATGGAGGAATGGATTCAGGAAGTCATTTATTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAGCTGTTTGAAGAGGTTAAGGCTGGAGATAGCACGCGGAAAATTTATGAGAAGAAATGTGCGCAGTTGAGAAATAAAAATGTTAGAGGAGATGATGAATTAAGCATGGACAAGACTAGATCTGATTTGAAAGATCTGTATGCTGGAATCTTGGTTGCAATTCGACGTGCAGAGTCGATCTCAAAGAGAATTCAGAAAATGAGAGATGAAGAATTACAGCCTCAAGTTGTCGAGCTATTGAAAGGCCTGACACAATCGTGGAAAATCATGTTGGAGTCCCATGAAACACAACAGAAGATTCTTTCTGAAGTCAAGTACTTCACATGTCCCGCGTACGGTAAATTCTGCAACCAATCTCGCGGATTGGCAACTCTTCAGCTCGAAGCCGAGCTACACCATTGGGGCATGTGTTTTAGAGAGTATACCGCAGCTCAGAAAGCATACGTAGAAGCACTGTGTGGATGGTTAAGTAAGTTCATAGTTCCTGAAGTTGAATTTTGCTCAAGAAGCAGAAATGTTTCCATGCCAATGCCATTTCATGTTAACGGTCCGCCATTGCTCATGATATGCAACGAGTGGTTAACTTCCCTACGAAAATTACCTGATAAGACGGTAATACTTGCGTTGAAAAGCGTTGTGAAAGACGTGAAAGCGCTTTGGATTCAACAATGTAAAGAGCAACAACAGAAGAGAAAAGTAGATAGCTTAACAAAAGATTTAGATCGAAGATATTTAGGGACGTATAAACTGAAGACTAAGATGCTTGAGTTGCAAGTAACAGAACATACATCATCAGAAGAGGAAACCGTTTGTGAAGACGAATGCATGATGGAGAAAAGTGATTACTTGGAGACACTTAGTAGAAAACTTGAGGCAGAGAAAGAGAAGCATTACAGTTGCATGCAAGAAACTCAAAGGATGACATTGAATGGAATGCAATTTGGATTTTCTCGAGTTCTAGAATCTTTGACAGAGTTCTCTAAAGCATCACAGAAAATGTACAATGATCTTGTGACTTTCAGTGAGAAAACTGAGAATGTTTCGTATATAGAAGGTGGTTGCAATGTGGAAAACTGCAGCAACCAAAATGGACAATAG 2253 0.4106 MGCVASRLEEEEEVVAICRERKRQLKLAVERRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPKEGFDPSPSHSSSENVINNPMFLQQTPSETKHETVACDSCIASSSTTSESSDEEGEGEGEEGEGGREEVNEQPCEYYYMQMPMHMSMPVPPSMPSPHRDFGWDFFYPFDSMRPEVMNGYHRNSDDDLRAVREEEGIPELEEEVEREEEIEHKVVVNVEEKSNEGGGRVMSGVETADTKTVNVASENVGEQKGLAVLDTPAEGRELLEALKDIEDYFIRAYESGKGVTKMLEANRIPLHSSLEEIKESSTKLINAITWKSMSSRQSSCKSLVVQNMKDSSSWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKIYEKKCAQLRNKNVRGDDELSMDKTRSDLKDLYAGILVAIRRAESISKRIQKMRDEELQPQVVELLKGLTQSWKIMLESHETQQKILSEVKYFTCPAYGKFCNQSRGLATLQLEAELHHWGMCFREYTAAQKAYVEALCGWLSKFIVPEVEFCSRSRNVSMPMPFHVNGPPLLMICNEWLTSLRKLPDKTVILALKSVVKDVKALWIQQCKEQQQKRKVDSLTKDLDRRYLGTYKLKTKMLELQVTEHTSSEEETVCEDECMMEKSDYLETLSRKLEAEKEKHYSCMQETQRMTLNGMQFGFSRVLESLTEFSKASQKMYNDLVTFSEKTENVSYIEGGCNVENCSNQNGQ* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5327 750 Coils Coil 202 222 - -
Psa6g5327 750 MobiDBLite consensus disorder prediction 114 142 - -
Psa6g5327 750 PANTHER OS09G0542500 PROTEIN 1 733 - -
Psa6g5327 750 MobiDBLite consensus disorder prediction 124 138 - -
Psa6g5327 750 PANTHER UNCHARACTERIZED 1 733 - -
Psa6g5327 750 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Psa6g5327 750 Coils Coil 8 28 - -
Psa6g5327 750 Pfam Protein of unknown function (DUF632) 278 602 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5327 Psa-Chr6 466822234 466826196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5327 155 630 Acyl Lipid Metabolism Gene Families AT2G27090 31.123 3.64e-52 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5327 - - gmx:100807897 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5327 6 466822234 466826196 Psa6g5327 6 466822234 466826196 ECH