Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5321 ATGGCGTTTTGGCACCGATTCCGTAACTCTAACCTCAAAACCTTATACTCCCAATTTCACACATGTTACACTCATCATCTTCCCCATTCTCCTCTCTCCAATTCCACCCCCAAAACTACCCCTATTCCGCATCCCCTTTTCCATCACAAACCCTCATTTGTTTTCAATAGCGTCAGGTTTTTCGCTGTCCCCGTTCAGTTTCAGGTTAAGCCTAAGAATGAGGATGATGATGACTCAGATGGACCACGGTTGAATGATCAAATCAAAGCTAAATTTGTCAGACTTGTGATGGATGATGGACATTCAGTAGTTTCAAGGGTTGAAGCATTGGAACGTGCCAAGAAGCTTAAATTTGATTTAGTTGAGGTTGATAAAAATGCTAAGCCACCTGTTTGTAAAATCATGGACTTCCACAAGGAAATGTACAAGAAAAAAGAAAATGACAAGGAACGTGCTAAAAGCAAGTCTGAGATGACAATGCGAAAGGAATGTAAGGAAGTACGATTTTCTGAAAAAACCGAATCAAAAGACCTTAAGATGAAAGCAGACATGGTTCGAAAGTTAATGGAGAAAGGTTATCGGGTGAAGGTCAAGGCAACAGGCAACGCGGATCAGGCCATGTTAGACTCAATATCCCGTCTTTCGGCTCTGATAGAAGATGTCTGTATTGTGGAAAGTGGGCCACATTTGACAAAAAAAGAAGCTTATATGATAGTCAGACATCTGAAATATGGACCGGCTAAGAAAGGTGTGAAAAAATCTCAAGATGCCGTACATACGGATGTGAAAGCCGAGGAGGGTGATGTGGAACCATTAACTGCCAGTTCTAGTGATTCTATTGACCATAAGAATCAGAGTTCTCCTGAATATCAGTTTGAAACACAAGAGGCATTGATTTCTCATGGTAACAAGCAATTTCCATTCTCGGCTGATAGATCAGATAAAAGTGTCAACGACAGGAATGATTCAGTTTCTCCACCCGTACTAGAAAATAGATATAAAAAAGCTAATCATCGTGGCGAGAACAAGGTTCAACCAAATGCGCAGGTGCCTCCTGCTGTGACTGAAAATAGGTACAGAAAAGCTGAGCCAAGAAATAGGTCCCAACAAACAACACCGAACACAAATCCAGTGACAAGAGACACAAACAGGTGGACACCCTCGAATTCAAATCACCCTCCTGGATCAAGAAGCCCGATGCCTTCCCGTGACAGTACCCACCCGAATCCTAGAGGTCCGAATACAAAAAGTCCCGGCTACGGTCTTTTTAGTAGAGATACATAG 1284 0.4229 MAFWHRFRNSNLKTLYSQFHTCYTHHLPHSPLSNSTPKTTPIPHPLFHHKPSFVFNSVRFFAVPVQFQVKPKNEDDDDSDGPRLNDQIKAKFVRLVMDDGHSVVSRVEALERAKKLKFDLVEVDKNAKPPVCKIMDFHKEMYKKKENDKERAKSKSEMTMRKECKEVRFSEKTESKDLKMKADMVRKLMEKGYRVKVKATGNADQAMLDSISRLSALIEDVCIVESGPHLTKKEAYMIVRHLKYGPAKKGVKKSQDAVHTDVKAEEGDVEPLTASSSDSIDHKNQSSPEYQFETQEALISHGNKQFPFSADRSDKSVNDRNDSVSPPVLENRYKKANHRGENKVQPNAQVPPAVTENRYRKAEPRNRSQQTTPNTNPVTRDTNRWTPSNSNHPPGSRSPMPSRDSTHPNPRGPNTKSPGYGLFSRDT* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5321 427 Pfam Translation initiation factor IF-3, N-terminal domain 84 150 IPR019814 GO:0003743|GO:0006413
Psa6g5321 427 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 1 397 - -
Psa6g5321 427 MobiDBLite consensus disorder prediction 308 427 - -
Psa6g5321 427 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 81 153 IPR036787 GO:0003743|GO:0006413
Psa6g5321 427 Coils Coil 135 155 - -
Psa6g5321 427 Gene3D - 75 151 IPR036787 GO:0003743|GO:0006413
Psa6g5321 427 MobiDBLite consensus disorder prediction 366 413 - -
Psa6g5321 427 TIGRFAM infC: translation initiation factor IF-3 84 238 IPR001288 GO:0003743|GO:0006413
Psa6g5321 427 Gene3D - 159 247 IPR036788 GO:0006413
Psa6g5321 427 MobiDBLite consensus disorder prediction 272 291 - -
Psa6g5321 427 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 163 243 IPR036788 GO:0006413
Psa6g5321 427 PANTHER TRANSLATION INITIATION FACTOR IF-3 1 397 IPR001288 GO:0003743|GO:0006413
Psa6g5321 427 MobiDBLite consensus disorder prediction 249 268 - -
Psa6g5321 427 MobiDBLite consensus disorder prediction 248 291 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5321 K02520 - gmx:100808433 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5321 6 466459959 466465318 Psa6g5321 6 466459959 466465318 ECH