Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5318 ATGGTGAAAAATGGTTGGCAAGGCTTTGGGATGCTTCTGTGTTGGATACATCCGCTTGTAACTACAACTTTGATTACGGGGAAACAAACATCAACAACTTCCTTCAAGGACGACACAAGAAAGCATGGACCCCATGAGGTTCGTTGTGTTAGAAGGAAGTTATTGTTGGAAGCCTTTGCCAATGAGCTTCCAAGTGGAACCATTAGGTACATGTCAAGGGTGGTTGCTATTCAAGAATCTGGCTTCTCAAAGATACTACATCTTGCTGATGGAACAACAATCAAAACCAAGGTATTGATCGGGAGTGATGGAATAAACTCTATAGTGGCAAAGTGGCTAGGCTTCAATGAGGCTTCTCCCATAGGAAAATATGCAACCAGAGGTTATGTAGAGTTGAACAACACTCACCAGTTGGAACCATTATTCATGCAATACTTTGGCAAAGCACAAGAGCCAGCTAAACTGAAACAATATGTGTTAAACAAGTTAGAAAATATGCCAAGTTATGTTAGATCTTTCATAGAAAACACAGAGTTAGATGCTTTTCATTTAGCTCCATTGAGACATAGACATCCTTGGGAGCTTATAATGAAAAATATTAGTAAAGGAAATGTTTGTGCTGTTGGAGATGCTTTACACCCTATGGCACCTGATCTTGCTCAAGGGGGGTGTAGTACTTTAGAGGATGGGGTGGTTTTAGCAAGGTGCTTGGGTGAGGCTTTTTCCAAGAATTTAAAGGAAGGAGAAGAAGAATATAAAATGATTGAGGAAAGTTTGAAGAAATATGCAAAGGAGAGAAGATGGAGATGCATTGATCTCATTACTAGATCTTATATTGTGGGTTCCATTCAACAAAGTGGTTCTAAATTGGTTAATTTCTTTAGGGATCAAATTTTGGCTACATTTCTAGCTGATGAGCTGTTGAAGAAGTCAGAGTTTGATTGTGGAGAATTAAAATAG 960 0.3896 MVKNGWQGFGMLLCWIHPLVTTTLITGKQTSTTSFKDDTRKHGPHEVRCVRRKLLLEAFANELPSGTIRYMSRVVAIQESGFSKILHLADGTTIKTKVLIGSDGINSIVAKWLGFNEASPIGKYATRGYVELNNTHQLEPLFMQYFGKAQEPAKLKQYVLNKLENMPSYVRSFIENTELDAFHLAPLRHRHPWELIMKNISKGNVCAVGDALHPMAPDLAQGGCSTLEDGVVLARCLGEAFSKNLKEGEEEYKMIEESLKKYAKERRWRCIDLITRSYIVGSIQQSGSKLVNFFRDQILATFLADELLKKSEFDCGELK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5318 319 Coils Coil 245 265 - -
Psa6g5318 319 SUPERFAMILY FAD/NAD(P)-binding domain 20 305 IPR036188 -
Psa6g5318 319 Pfam FAD binding domain 186 242 IPR002938 GO:0071949
Psa6g5318 319 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 17 149 IPR044560 -
Psa6g5318 319 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 149 319 IPR044560 -
Psa6g5318 319 PANTHER MONOOXYGENASE 2-RELATED 17 149 - -
Psa6g5318 319 PANTHER MONOOXYGENASE 2-RELATED 149 319 - -
Psa6g5318 319 Gene3D - 16 299 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5318 Psa-Chr6 466202684 466211074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5318 45 318 Miscellaneous Gene Families AT5G05320 48.197 9.79e-99 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5318 - - mtr:MTR_1g112780 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5318 6 466202684 466211074 Psa6g5318 6 466202684 466211074 ECH