Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5310 ATGGCGAAACCAGTTTCAATCGAAGTTTGGAATCCAAACGGAAAATACAGAGTTGTTAGCACCAAATCAATGCCTGGAACTCGTTGGATCAATCTTCTCATTCAGCAAGATGTTCGTCTTGAAATATGTACCGAGAAGAAAACTATTCTGTCTGTTGAAGATATCATTGCTTTGATTGGTGATAAGTGTGATGGAGTTATTGGACAGCTGACTGAAGACTGGGGAGAAGAGTTGTTCTCTGCTTTGAGCAAAGCAGGAGGCAAAGCTTTCAGTAATATGGCTGTTGGTTATAACAATGTGGATGTCAATGCTGCAAACAAGTACGGTGTTGCTGTTGGAAATACTCCTGGAGTACTCACAGAGACTACAGCAGAGCTGGCAGCATCACTGTCTTTGGCAGCTGCTAGAAGGATAGTTGAGGCGGATGAGTTCATGAGGGCAGGGCTATATGATGGATGGCTACCTCATCTATTTGTTGGAAACCTACTCAAAGGGCAGACTGTTGGTGTTATCGGTGCTGGCCGAATTGGATCAGCCTATGCAAGAATGATGGTTGAAGGGTTCAAGATGAACCTGATATACTTTGATCTCTACCAAGCTACGAGACTCGAAAAGTTTGTCACAGCTTATGCTGATTTCTTAAAGGCAAATGGTGAAACTCCGGTGACTTGGAAAAGGGCGACGTCCATGGACGAGGTTCTCCAGGAGGCTGATATAATTAGTCTTCATCCTATCTTGGATAAAACCACTTATCATCTAGTCAACAAGGAAAGACTCGCCAAGATGAAGAAGGAAGCAATTCTTATAAACTGCAGTAGAGGACCTGTTATCGATGAAGCTGCACTTGTGGAACACTTGAGACAGAATCCATTGTTCCGTGTAGGCCTTGATGTGTTTGAGGAAGAGCCCTACATGAAACCCGGGCTTGCAGAGTTGAAGAACGCCATTGTAGTACCACACATTGCATCTGCTTCCAAGTGGACCCGTGAGGGAATGGCGACACTAGCCGCTCTTAACGTGCTGGGAAAGATCAAAGGCTACCCAGTATGGTTTGATGCCAACAGAGTGGAACCATTCCTCAACGAGAACGGTAAACCTCCAGCTGCATGCCCAAGCATTGTTAACGCAAAAGCCCTGAGTTTGCCAGTTTCGAAGCTGTAG 1161 0.4522 MAKPVSIEVWNPNGKYRVVSTKSMPGTRWINLLIQQDVRLEICTEKKTILSVEDIIALIGDKCDGVIGQLTEDWGEELFSALSKAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQATRLEKFVTAYADFLKANGETPVTWKRATSMDEVLQEADIISLHPILDKTTYHLVNKERLAKMKKEAILINCSRGPVIDEAALVEHLRQNPLFRVGLDVFEEEPYMKPGLAELKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPVWFDANRVEPFLNENGKPPAACPSIVNAKALSLPVSKL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5310 386 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 130 322 IPR006140 GO:0051287
Psa6g5310 386 Gene3D - 118 321 - -
Psa6g5310 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 120 323 IPR036291 -
Psa6g5310 386 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 37 156 - -
Psa6g5310 386 PANTHER ZGC:136493 28 370 - -
Psa6g5310 386 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 28 370 - -
Psa6g5310 386 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 347 IPR006139 GO:0016616|GO:0051287
Psa6g5310 386 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 196 IPR029752 -
Psa6g5310 386 CDD GDH 16 346 - -
Psa6g5310 386 Gene3D - 18 346 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5310 K15893 - gmx:547640 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5310 6 465912032 465915648 Psa6g5310 6 465912032 465915648 ECH