Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5240 ATGGTCAGTTGTGAATCCGTTATGGAACATTCGGATTCAGCAATTGCGTCGCCTCTTTCTGCCATAGCCGACGCTTTTGAAGATCTCCTTGAAAAGGTTAAGGATTTCAAGAAGGGTTCATCCGATCACATTCGATTAGATAATTTCTGCGAAATTGCATCTCTTGTTACTGTTCTTTTCCGTTGTCTTGGCCTTGCTTTCAAATTCGCTGAAATGGAATACGTTTCTAAGCTACATGGACTAGTGGAAGCATCAAAGAAGTATGAGATGCTACAAGATATAATTGACCATGATGTGGCCAATGACACAGTCAAAACATCAGGAAGCTATTCACGTAACCTACGCAGAGTTCGGCAGGGTATTGATCTCGTGAGAGCTATATTTGAACAACTTTTGTCAACCAGTGATACTTCTCTGAAAGGAGTGGCTTCAACGGCCTATGGAGAGGTTTGTGCACCGTTTCACTCGTGGACTGTCAGAACGGCTGTGTATGCTGGGATGTATACACTTCCGACGAGAGACCAATTGTTTTTAAAGCTCAATGAAACAGAGCAAACAGCGGAAAAGAAGATGAGAAGGTACATTAGTGCTACGATTCCGGTTATAGAATACATTGATAAACTATACCTTTCTCGAAATATTGTATTGGATTGGTGA 657 0.4155 MVSCESVMEHSDSAIASPLSAIADAFEDLLEKVKDFKKGSSDHIRLDNFCEIASLVTVLFRCLGLAFKFAEMEYVSKLHGLVEASKKYEMLQDIIDHDVANDTVKTSGSYSRNLRRVRQGIDLVRAIFEQLLSTSDTSLKGVASTAYGEVCAPFHSWTVRTAVYAGMYTLPTRDQLFLKLNETEQTAEKKMRRYISATIPVIEYIDKLYLSRNIVLDW* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5240 218 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 13 218 - -
Psa6g5240 218 Gene3D Glycolipid transfer protein 10 218 IPR036497 -
Psa6g5240 218 PANTHER ACD11 HOMOLOG PROTEIN 13 218 - -
Psa6g5240 218 Pfam Glycolipid transfer protein (GLTP) 44 182 IPR014830 GO:0005737|GO:0120009|GO:0120013
Psa6g5240 218 SUPERFAMILY Glycolipid transfer protein, GLTP 41 215 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5240 Psa-Chr6 461127110 461129882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g5240 11 218 Acyl Lipid Metabolism Gene Families AT4G39670 63.333 4.83e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5240 - - aprc:113872428 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5240 6 461127110 461129882 Psa6g5240 6 461127110 461129882 ECH