Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5024 ATGAACTACCAAGCGGTAGCGCTCGCTTTCATGGCGGCAATTTGCACGTCGACGGTAATCGACGACGAAAACCTCATCCCTCCTCGCCGCGAACTTTACGATAACGGAAGAATCTTCGATATCACTCACAGGTATCACCCGGACATGCCAGAGTTTGAATCTAAAAACGGTATCGGTCAATTCCTGTGGCTTCCAAAGAGCATGAAAAACGGTTCCATCGCTAATAACTCTGAAATGAAACTTCCGGCTCATACCGGAACTCATGTTGATGCACCTGGCCACGTCTACGATCACTACTTCGATGCTGGATTTGATGTTGATTCACTCGACTTGCACGTCCTCAATGGTCCTGCTCTTTTAGTTGATGTTCCAAGAAATAGTAATATAACTGCTGAAGTTCTGAAGTCATTAAATATCCCCAGGGGTGTAAAGCGTGTACTCTTCCGAACATTAAATACCGACAGGCGGCTTATGTTTCAGAAGGAATTTGACTCAAACTATGTGGGGTTCACTGTAGATGGAGCAAAATGGCTAGTGGAAAACACCGATATCAAACTTGTTGGTATTGACTACCTATCTGTTGCTTCTTATGATTACTTGATTCCATCCCACCTTGTGTTTTTAAAAGACAGGGTAAGAAAAAGAGTCTTTTATTTCTGA 660 0.4333 MNYQAVALAFMAAICTSTVIDDENLIPPRRELYDNGRIFDITHRYHPDMPEFESKNGIGQFLWLPKSMKNGSIANNSEMKLPAHTGTHVDAPGHVYDHYFDAGFDVDSLDLHVLNGPALLVDVPRNSNITAEVLKSLNIPRGVKRVLFRTLNTDRRLMFQKEFDSNYVGFTVDGAKWLVENTDIKLVGIDYLSVASYDYLIPSHLVFLKDRVRKRVFYF* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5024 219 Gene3D Putative cyclase 32 216 IPR037175 GO:0004061|GO:0019441
Psa6g5024 219 Pfam Putative cyclase 39 194 IPR007325 GO:0004061|GO:0019441
Psa6g5024 219 PANTHER CYCLASE-LIKE PROTEIN 2 11 211 IPR007325 GO:0004061|GO:0019441
Psa6g5024 219 PANTHER KYNURENINE FORMAMIDASE-LIKE ISOFORM X1 11 211 - -
Psa6g5024 219 SUPERFAMILY Putative cyclase 36 210 IPR037175 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5024 Psa-Chr6 435127254 435130712 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5024 - - gmx:100782032 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5024 6 435127254 435130712 Psa6g5024 6 435127254 435130712 ECH