Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5021 ATGGGCAAGCCTAATACAAGATCAGTTTCATCGGAATCTAAGTCCGATCTCAAGATGGAAAAGAAGGAACGATTTTATGCCAATGTGAAGTCTACTGTTGCTTCCTTGACTGCCCAAAAGTTTGCTAAGAAGTCTATTGCTAAGAAGAAGAGCAAACAACAAAGGCGGCAGGAAAAAAAATTGAAAGCATATAGCCTCTCTTCCCTCTTAGAAACCCTTCCGGAGTTGAAGGAACAGTTGAAGGCACCACCGAAACCACTAGAGGCTAACTTCAAGCTTAACTGTAAAAATAGACAGAAATTAGTATTGGAGGAAGGAAAAAATTTGTCTGAGATTATTAAGAATCATTCTTTCCAAACGAATCCTTTGGCTGCCATTCATCAACACTTAAGGAACCAACAACCAGTACCGGTAGTAGAGGAACAACAACCCAAGAAAAATGCGAATGTAAATGGGTCGAGAAGGAGGAAGATGAAGAAAGCTCGGGATGGAGTGCAGTCTATGGATATATAA 513 0.4035 MGKPNTRSVSSESKSDLKMEKKERFYANVKSTVASLTAQKFAKKSIAKKKSKQQRRQEKKLKAYSLSSLLETLPELKEQLKAPPKPLEANFKLNCKNRQKLVLEEGKNLSEIIKNHSFQTNPLAAIHQHLRNQQPVPVVEEQQPKKNANVNGSRRRKMKKARDGVQSMDI* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5021 170 Pfam Ribosome biogenesis protein SLX9 11 133 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Psa6g5021 170 PANTHER PROTEIN FAM207A 9 136 - -
Psa6g5021 170 MobiDBLite consensus disorder prediction 135 170 - -
Psa6g5021 170 MobiDBLite consensus disorder prediction 135 149 - -
Psa6g5021 170 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5021 - - mtr:MTR_1g107495 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5021 6 435007636 435010221 Psa6g5021 6 435007636 435010221 ECH