Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g5008 ATGGTGGAACCTAAACGGATCTCCGTTTATCACGCTCTCGGCGCCGGCTTAGTTGCTGATGTGCTGCTATGGAAGAATTGGCGTGGAGGAGTTGCGGTGCTGAGTTCGGCAACCACATTGTGGTATCTGTTTGAGCGAGCCGGTTATAACTTCTTGTCGTTTGTGGCTAATGTGATATTGCTTCTAGTTGTGATTCTGTTTTTATGGGCTAAAGCTGCTAATCTTCTTAATAGACCGCTCCCTCCTCTGCCTGATCTGGAGATCTCGGAGGAAACTATTGGGAAGTTTGCTGATGCACTTCAAATTTGGATAAATCGGGCTTTGTCTGTTGCACATGATATAGCAATTGAGAGGAATTTGTTGCTTTGTCTACAGGTTGTTGGTGTATTGTTGACGATATCTTATCTTGGTAGTCTGTTTAACTTTCTGACTTTGATCTATATATGTGTTCTTCTTAGCTTGTCTCTTCCCGTGTTGTATGACAAGTACCAAGATCGATGCGATGAGAAGATACACATTGTACATGGGGTTGTTCACCCACATTATCGAAAGGTTCACAGCATTATTTTGAGCATTATTCCAAATCGTGCAAAAAAAGAAAAGAAGGTGCAGTAG 615 0.4244 MVEPKRISVYHALGAGLVADVLLWKNWRGGVAVLSSATTLWYLFERAGYNFLSFVANVILLLVVILFLWAKAANLLNRPLPPLPDLEISEETIGKFADALQIWINRALSVAHDIAIERNLLLCLQVVGVLLTISYLGSLFNFLTLIYICVLLSLSLPVLYDKYQDRCDEKIHIVHGVVHPHYRKVHSIILSIIPNRAKKEKKVQ* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g5008 204 ProSiteProfiles Reticulon domain profile. 18 204 IPR003388 -
Psa6g5008 204 PANTHER RETICULON-LIKE PROTEIN B11 4 203 - -
Psa6g5008 204 Pfam Reticulon 18 171 IPR003388 -
Psa6g5008 204 PANTHER RETICULON 4 203 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g5008 Psa-Chr6 434403386 434406945 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g5008 K20723 - gmx:100527029 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g5008 6 434403386 434406945 Psa6g5008 6 434403386 434406945 ECH